Favorite Composite Part
Endosymbiotic bacteria have evolved intricate delivery systems that enable these organisms to
interface with host biology. The extracellular contractile injection systems (eCISs), are
syringe-like macromolecular complexes that inject protein payloads into eukaryotic cells by
driving a spike through the cellular membrane. In recent years, many synthetic biologists have
paid more attention to a subtype of eCISs: the Photorhabdus virulence cassette (PVC). [1] At the
same time, our team noted the increasing demand for weight-loss drugs in recent years, so we set
our sights on Uncoupling protein UCP1, which has excellent potential and broad application
prospects as a potential target for weight loss. In our registered and submitted parts, we
provide a series of components using different combinations of parts to generate diverse PVCs
and Payloads. Our favorite composite part
Pdp1NTD-3*GGSGG-EGFP-2*GGGSG-UCP1->PAU_RS24015->PAU_RS16560->PAU_RS16565->PAU_RS16570(BBa_K4960031)is
constructed with a Pdp1NTD-3*GGSGG-EGFP-2*GGGSG-UCP1(BBa K4960021) and four regulator
genes: PAU_RS24015(BBa K4960017), PAU_RS16560(BBa K4960018), PAU_RS16565(BBa
K4960019), PAU_RS16570(BBa K4960020).(Figure 1)
Figure 1. Schematic of the PVCpnf locus. It contains 16 structural and accessory genes , followed by two payload genes (Pdp1 and Pnf, in red) and four putative regulatory genes (in pink).
Special Design
Referring to the work of Kreitz et al., PAU_RS16570-RS24015 (BBa K4960017-K4960020) has a
regulatory effect on the assembly of PVC particles However, it is not clear what specific
function each of the four genes has. We targeted one of them (PAU_RS16570) with site-specific
mutation to silence its expression and purify PVC by packaging. The negative-stain transmission
electron microscopy on purified PVCs showed without this gene, PVC cannot be assembled to
function properly. (Figure 2) This result indicates that the four regulatory genes are essential
for proper PVC folding. Therefore, we decided to retain the most complete structure for our
project.
Figure 2. Charactrization of the assembled PVC_(EGFP-UCP1)^(EGFR-targeting) ΔPAU_RS16570 particles by negative-strain TEM. TEM images depicting the results of purification without PAU_RS16570, indicating the four regulatory genes are essential for proper PVC folding. Scale bar, 600 nm.
Characterization
To validate the function of this part, We constructed pNC093, a pPayload plasmid carrying
Pdp1NTD-EGFP-UCP1 payload . By electroporating E. coli cells with both pNC093 and a pPVC
plasmid carrying E01DARPin (pNC090), we could then get a PVC_(EGFP-UCP1)^(EGFR-targeting)
particle that specifically targets EGFR-expressing cells and delivers Pdp1NTD-EGFP-UCP1 protein
(Figure 3a). To validate whether Engineered Mitochondrial Uncoupler Pdp1NTD-EGFP-UCP1 protein could be correctly expressed, we
performed SDS-PAGE and scanning electron microscopy analysis on purified
PVC.
Upon analyzing the SDS-PAGE results, we observed a distinct band at approximately 69
kDa, which closely resembles Engineered Mitochondrial Uncoupler Pdp1NTD-EGFP-UCP1. (Figure 3b). In the meantime, negative-stain
transmission electron microscopy on purified PVCs (Figure 3c) showed similar structures to the
Cre-carrying PVCs in (Figure 1b), suggesting that the Engineered Mitochondrial Uncoupler Pdp1NTD-EGFP-UCP1 could be correctly
loaded into the PVCs. Additionally, by incubating these PVC particles with HEK-293T cells
transfected with either pNC089 (PCMV-EGFR) or pcDNA3.1(+) plasmids. we demonstrated these
PVC_(EGFP-UCP1)^(EGFR-targeting) particles could selectively enhance the energy expenditure in
EGFR-expressing cells (Figure 3d). Altogether, our findings demonstrate a successful engineer of
a PVC-based strategy to boost cellular energy expenditure by specifically deliver UCP1 into
target cells.
Figure 3. Delivery of the Fat Burning Payload through PVC_(EGFP-UCP1)^(EGFR-targeting) Particles to HEK-293T Cells.(a) Schematic representation of the construction of PVC_(EGFP-UCP1)^(EGFR-targeting) particles.(b, c) Charactrization of the assembled PVC_(EGFP-UCP1)^(EGFR-targeting) particles by SDS-PAGE(b) and negative-strain TEM (c). Scale bars, 100nm.(d) Charactrization of cellular metabolism in PVC_(EGFP-UCP1)^(EGFR-targeting) treated HEK-293T cells transfected with either pNC089 or pcDNA3.1(+) plasmids. Glucose concentration in the cell culture medium was measured 48 h after PVC_(EGFP-UCP1)^(EGFR-targeting) administration; data shows mean±SD, n=3 independent experiments.
Composite Parts List
Registry No. | Description | Function |
---|---|---|
BBa_K4960031 | Core expression cassette of pPayload plasmid to generate PVCs carrying Pdp1NTD-EGFP-UCP1 | Payload |
BBa_K4960032 | CMV promoter-> Engineered Mitochondrial Uncoupler Pdp1NTD-EGFP-UCP1->polyA | Payload |
BBa_K4960033 | pvc17 (SepC, Pdp1 NTD), Pdp1 NDT-3*GGSGG-Cre-GSSG-HiBiT、PAU_RS16570, PAU_RS16565->PAU_RS16560->PAU_RS24015 | Payload |
BBa_K4960034 | pvc1-pvc12->pvc13_NTD-2*Bsal-pVc13_CTD->pvc14-pvc16 | Structural and accessory genes |
BBa_K4960035 | pvc1-pvc12->pvc13_ NTD-CKGGRAKDC -pVc13_CTD->pvc14-pvc16 | Structural and accessory genes |
BBa_K4960036 | pvc1-pvc12->pvc13_NTD-1*GGGSG-CKGGRAKDC-1*GGGSG -pvc13_CTD->pvc14-pvc16 | Structural and accessory genes |
BBa_K4960037 | pvc1-pvc12->pvc13_NTD-3*GGGSG-CKGGRAKDC-3*GGGSG -pvc13_CTD->pvc14-pvc16 | Structural and accessory genes |
BBa_K4960038 | pvc1-pvc12->pvc13_NTD-1*EAAAK-CKGGRAKDC-1*EAAAK -pVc13_CTD->pvc14-pvc16 | Structural and accessory genes |
BBa_K4960039 | pvc1-pvc12->pvc13_NTD-3*EAAAK-CKGGRAKDC-3*EAAAK-pVc13_CT->pvc14-pvc16 | Structural and accessory genes |
BBa_K4960040 | pvc1-pvc12->pvc13_NTD-2*GGGSG-E01 DARPin-2*GGGSG -pvc13_CTD->pvc14-pvc16 | Structural and accessory genes |
BBa_K4960053 | CMV promoter-> Pdp1NTD-3*GGSGG-EGFP-2*GGSGG-UCP1->polyA | Payload |
Reference