human practices page header
The tree of human practices
Figure 1: The values of our project

Before starting our human practices journey, we wanted to develop a clear plan regarding the people we were going to get in touch with. We wanted to get more spherical feedback for our project. That's why we not only aimed to meet with people from many different backgrounds, but we also prioritised meeting with communities that have faced the destructive consequences of forest fires and with experts that specialise in this matter.

More specifically, during the year we approached scientists, environmentalists, engineers to ensure that our project is beneficial and is developing with respect to the environment and nature. We visited legal experts, bioethicists, social scientists to ensure the ethical, legal, and social aspects of our project. We visited stakeholders to see how official institutions view our product. We visited companies and economical scientists to find out about the scalability and feasibility of our product in the market. Finally, we participated in a lot of events that gave us the chance to get in touch with people from different ages, social, economic and educational backgrounds, as well as with people that were immediately affected by the problem and our solution. In this way we ensured that our priorities were the proper ones and got feedback about how we could become better.

All these meetings helped us set our values straight (environmental conservation, sustainability) and incorporate them into our project’s structure.


Understanding the problem

The people and experts helped us understand the problem, and learn about the soil conditions after wildfires.

Current solutions &
The Need

Stakeholders, scientists, and engineers that informed us about the current solutions and practices in order to realize the strengths and weaknesses of our project.

Stakeholders

Stakeholders that specialize in the fields regarding our project, that can help with the future implementation, or that they would be our potential clients.

Project Values & Feedback

Through our activities we focused on communicating our project values and simultaneously collect opinions for our project from people with different ages and backgrounds.

Biosafety, Bioethics & Legislation

As researchers we value the importance of biosafety. We tried to not only create a product safe enough to be released later in nature but to also stay informed about how to safely perform our experiments.

Euphoresis’ Affected Communities

The opinion from people that have dealt with the problem we are trying to provide a solution for is of great importance, since Euphoresis might be used by their community in the years to come.

Negative feedback

We took into consideration any negative feedback we got from people we got in touch with. This helped us construct a well thought out project.

Future Implementation

The people and experts that suggested to us ways to implement our idea, modifications to expand our future prospects and possibilities.

SynBio Principles

Synthetic biology is a scientific field not widely known in Greece. That's why many of our actions included informing the public that show interest about this science field.




Istiaia Forestry Department
To whom did we reach out and why?

Knowing the severity of forest fires in our country, we sought to engage with an expert who could provide us with information about their impact and the means they use to minimize their consequences. We got in touch with Mr Thalassinos Georgios, head of the Forestry Fepartment of Istiaia, one of the many villages that were affected by the destructive fires of 2021 in Greece.

How were the ecosystem and the community affected?

According to Mr. Thalassinos, over 68% of forest land was destroyed, resulting in various ecological and economic problems. More specifically, a change was observed in the climate and the soil factors of the area, resulting in severe loss of the biodiversity of the flora and fauna. At the same time, many citizens who depended on the production of resin from forest trees lost their main source of income.

What existing solutions did they implement?

In response to a question regarding how they handled these issues, he said that the state mandated the replanting of the burned land and prohibited hunting. As quickly as possible, the charred trunks and branches were gathered so that the aforementioned procedures could start and the plant infections that thrive in these trunks could be eliminated. The forestry staff also put in tree trunk pieces to lessen the likelihood of flooding. Thankfully, the threat of floods was removed thanks to these steps and the mild winters of 2021 and 2022.

What is the conclusion of the meeting?

After our instructive conversation, we had a greater understanding of the most essential issues that arise during a wildfire and appreciated the significance of our effort. We got a better understanding of current practices and the areas we need to concentrate on more in order to develop a workable strategy to stop the dangers that follow forest fires.

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Photograph of our meeting with Dr Xanthopoulos
Who are the experts?

Drs Xanthopoulos and Michalopoulos from the Institute of Mediterranean Forest Ecosystems and Technology of Forest Products.

In what specific cases is our project necessary?

As other experts informed us, the hydrogel can be used to stop water runoff for the same amount of time as the tree trunks. However, there are times when the threat of desertification increases, and in certain situations, our product could be an auxiliary. As they explained to us, soils with steep inclines are an important factor when it comes to the application of tree trunks, as human intervention is difficult. Since water cannot be absorbed, every soil with an incline of up to 25% is at a significant risk of corroding. Inferentially, our proposal becomes a plausible scenario to handle instances like the one above, where other ways are not applicable, due to the use of drones for the hurling of biopolymers.

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To whom did we reach out and why?

Dr Athanasios Papaioannou, a professor at Aristotle University of Thessaloniki in the department of Forestry that specializes in reforestation.

What was his overall opinion for our project?

He confirmed that wildfires are becoming a serious threat to our country. Under these circumstances soil’s organic matter is significantly reduced. Since terraformation is a yearlong procedure, the soil can easily get utterly destroyed to the point of desertification. He added that the only existing prevention method about this matter right now is by creating grids and barriers with tree trunks to the affected area. On the other hand, he commented that one negative aspect of our project is that it goes against the general belief that we should allow the forest to regenerate by itself. So, we might have some obstacles implementing our idea since some experts prefer the classic ways of dealing with the matter of burnt forest.

His input provided us with a clearer view of the problem and also confirmed the importance of our idea since the measures that prevent soil erosion are limited. What is more, we were more prepared and aware about how harshly a project like ours could be criticized.

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Photograph of our meeting

North Evia’s Affected Communities

Who did we meet with?

Mr Karamichalis Georgios, a municipal councilor, Mr Koutrodimos Sakis, a farmer and Mr Karafillis Dimitris, a reporter from Istiaia, shared with us their experiences about the devastating events of the fires in 2021. Our visit to the small village in North Evia helped us perceive a better picture of the consequences of forest wildfires. Understanding the problems that people in Istiaia deal with, even two years after the fires, was an important step in configuring our project based on the actual needs of the affected communities.

Mr Karamichalis Georgios, Municipal Councillor

What was his opinion on our project?

Forests have a major role in the everyday life of the community in the village. Mr. Karamichalis informed us that over 85% of the honey production in Greece was coming from beehives in the forests of North Evia, and the existing beekeepers were over 5000, a number that dramatically decreased after the wildfires. Regarding our project, he expressed his positive view since, from his experience, he agreed that the soil is in great danger of erosion after a fire. He also believed that the public would have a positive opinion about our project if we clearly described it and its properties. He highlighted that villagers tend to be more suspicious regarding science issues, so we had to be very clear about our intentions when implementing our product.

Who would, in his opinion, be the buyer of our product?

A possible ideal buyer would be any region of the country that would later distribute it to the municipalities where it’s needed. He once again pointed out the importance of the analytic description of the biopolymer regarding its levels of functionality in any region. As he said, we always have to keep in mind that information about all the aspects of our product will build trust with future buyers, bringing us closer to a real implementation.

Mr Koutrodimos Sakis, Farmer

What was his experience with the problem?

We learned that a serious percentage of arable and forest land was destroyed. Even now, after two years, the soil hasn’t recovered, it is still not fertile, and their crops have no production. His income seriously decreased since a great percentage of his land was near the burned forest. The climate factors of the area changed, and a lot of plant illnesses were caused, especially to plane trees.

What were the consequences for other forest-related jobs?

The beekeepers also suffered significant damage. The beehives were destroyed, and even the ones that were left could not survive or produce honey since there were no trees to pollinate, making it necessary for the workers to move their facilities to other villages.

Regarding the resin producers, the government secured for them job positions at the local forestry department. Even though this kind of action would support these people financially, it can later cause a bigger issue. Since there are no motives for them to return to their previous occupation, the danger of the disappearance of these jobs is lurking.

What was his view for our project?

Through our conversation, he expressed his interest in our work. He believes that our material solves the biggest issues the soil is facing after a fire. Additionally, he was amused by the implementation of biopolymers in agriculture. He even stated that he and other farmers would be willing to try it for their crops, depending on the cost.

Mr Karafillis Dimitris, Reporter

Mr Krafillis, a local reporter, was very involved in the documentation of the fires his community had to face, which is why we valued his opinion. Apart from our project, we talked about the measures the government should take to prevent forest fires. Actions like fire-resistant zones all over the forests are necessary to avoid the consequences of wildfires like the ones they deal with in Istiaia. The soil erosion, the biodiversity loss, and the limited number of forest-related occupations are only some of the challenges after a fire. He hopes that our approach is the start of a product that will save the forest ecosystems in the future.

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WWF organization
Who did we contact, and why?

We contacted Dr. Giorgos Vlachos, who is the President of the Executive Committee of the Board of WWF Greece. We wanted to discuss with him the forest wildfires and how we could contribute to solving them.

What are the main problems after a wildfire that WWF is dealing with?

WWF is mostly focusing on the biodiversity issue. More specifically, in Greek forestry environments, there is a variety of unique and threatened flora and fauna. After the destructive wildfires, their population and their survival are at risk, as the environment is no longer friendly. Additionally, according to Dr Vlachos, forests in Greece are the biggest storage of carbon, so their loss is further causing climate deterioration.

What are the existing conditions for forest restoration?

He informed us that from their action in WWF, they have noticed that the areas that are facing the most problems are the ones with high slopes, the ones that have been through strong rains, and the ones that have been treated with wrong geological practices. He considered that the biopolymer could be useful in those areas where, currently, there is no effective intervention to prevent soil erosion.

Photograph of our meeting with Mrs.Aristoteli Papageorgiou
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Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Boroume Organization
What is the Boroume Organization?

Boroume is a non-profit organization located in Greece and functioning with the help of volunteers. It aims to reduce food waste and increase the food supply in Greece. We discussed with Mr. Alexandros Theodoridis, one of the founders of this organization.

What is the percentage of food waste from his experience?

Most of the fruit waste, specifically from oranges, comes from unharvested crop production. Over 1/3 of the production from the southern part of Greece remains in the fields. Mr. Theodoridis informed us that many people have fields with orange trees, but they usually can't afford the cost of their harvest. People from his team reach out to them, collect the fruits from them free of charge, and distribute them to people in need. Additionally, he stated that food processing companies have no motive from the government to adopt a more sustainable way of dealing with their waste. So, he believes that the amount of existing fruit and crustacean waste is significant, but he couldn’t provide us with the exact percentage.

Would the food processing companies provide us with their waste?

Generally, he believes the world's increasing interest in adopting more sustainable practices will push more businesses to reduce their waste and find more environmentally friendly ways to discard it. Lastly, he commented that if we provide our services for a price lower than they had to pay to discard their waste, we could, of course, easily find companies with the by-products we need.

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1st Panhellenic Bioscientists Student Conference
What was the purpose of our participation?

It was a great opportunity to communicate the principles of synthetic biology, the iGEM competition, and our project with students, professors, and professionals from the field of biosciences. Another positive aspect of the conference was the interaction with other Greek iGEM teams that also participated

What was the outcome?

We presented the 6-year history of the iGEM Thessaloniki team, our team, and our project. In the time between the lectures at the conference, we had the chance to get feedback and questions from specialists so that we could improve. One of the questions we got was whether the cost of the final product would be a deterrent factor. But, as we pointed out, the use of natural materials for the biopolymer is necessary since a synthetic hydrogel would pollute the forest. So, the increased cost, within certain limits, is inevitable. Additionally, we got to know the rest of the Greek iGEM teams’ projects and exchanged feedback and experiences about our journey towards the competition.

Photograph of our meeting with Mrs.Aristoteli Papageorgiou
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Our conference
Our Conference
How did we promote the field of synthetic biology?

The term synthetic biology is generally not widely known. Even though someone can easily find examples of biological systems like the production of insulin in their daily lives, most people don’t know that these systems have been generated in the field of synthetic biology. In our effort to change that, we desired to organize an event that everyone interested in keeping himself updated on the applications and comprehension of synthetic biology could attend. That’s when we put the idea of our conference, In the World of Synthetic Biology, into action. Our objectives were for someone to understand the potential of the scientific field we are working on in an intelligible way. Our speakers helped us achieve our goal of a successful conference with their interesting lectures and the interaction they had with the audience. Specifically, our speakers in the timeline of the conference were:

1) Speaker: Professor Mathiopoulos Kostas Lecture: «Principles and Standards of Synthetic Biology" 2) Speaker: Professor Michail Aivaliotis Lecture: «Synthetic and systems biology: the interdisciplinary challenge of the future» 3) Speaker: Professor Fragiskos N.Kolisis Lecture: «The contribution of engineering to the development of synthetic biology» Speaker: PhD Candidate in Biotechnology and Synthetic Biology, Anargyros Alexiou Lecture: «Synthetic biology and the road to sustainability» 4) Speaker: Professor Choli-Papadopoulou Theodora Lecture: «Tissue Engineering and Synthetic Biology» 5) Speaker: Professor Dimitris G. Hatzinikolaou Lecture: «Synthetic approaches to microbial biotechnology» 6) Speaker: Professor Karpouzas Dimitrios Lecture: «Synthetic microbial ecology: the more the merrier» 7) Speaker: Papoutsopoulou Stamatia Lecture: "Gene therapy and immunodeficiency» 8) Speaker: Professor Panagiotis Bamidis Lecture: «Contemporary Studies of Digital Medicine: - Precision Medicine» 9) Speaker: Professor Moschou Panagiotis Lecture: « Α new code affecting protein function and production» 10) Speaker: Professor Polidoros Alexios Lecture: «The Contribution of synthetic biology to plant improvement»

When we planned our conference, we considered that it was really important to include a more practical and hands-on part to give a complete experience to people who are interested in understanding better what synthetic biology is. Subsequently, we decided to organize two workshops, one in the field of the dry lab and one in the field of the wet lab. Our goal was for students and enthusiasts who would participate in our workshops to get in touch with some basic techniques, software applications, and their use to understand how things work. More specifically:

Dry Lab workshop: For the dry lab workshop, we presented the basic databases and software tools that can be used to design and combine the parts for cell transformation, like NCBI, Addgene, NEB, etc. Consequently, we presented analytically the use of Benchling and SnapGene, gave the participants a scenario of cell transformation, and guided them step by step through the way that the design of a plasmid can be done.

Wet Lab workshop: Our first intention was to organize a hands-on workshop about basic techniques for cell cultivation. In our announcement for the conference on social media, the participation in our wet lab workshop exceeded our expectations, and we decided to organize a hands-off workshop so that everyone who wanted to attend could. So, we decided to present thoroughly all the lab techniques that need to be followed for the genetic modification of bacteria, like PCR and its different types, plasmid and bacterial transformation, etc. In the end, we involved the participants in an interactive team quiz to ensure they gained knowledge.

The active and large attendance of the students and people who wanted to meet the world of synthetic biology surprised us positively. Overall, it was a really interesting experience for everyone involved.

How did we get feedback?

During the breaks of the conference, many people approached us to perceive a better image of our project. We observed that a concern for the solution we suggested was human interference in the forest, with the fear that we might prevent natural reforestation. But as we have mentioned before, the hydrogel will be applied only on crucial occasions where there is a high danger of soil erosion and desertification. Despite the concerns, our idea had a positive impact, and the support we received from everyone encouraged us to develop it more.

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Open-day KEDEK
What was the event?

CIRI (or KEDEK) is a Center for Interdisciplinary Research and Innovation, which belongs to our university. Like other research teams, we got invited to participate in the open day the center organized for the public.

How did we engage with the public?

The poster we had designed with details of our project drew the attention of the visitors who were amused by our idea. We discussed our inspirations with students, entrepreneurs, and university professors and in this way understood the perspective of people with different backgrounds. This is an important step in shaping our project based on the needs and opinions of diverse social groups.

What was their feedback and their concerns?

Most people we interacted with, even the ones not related to the field of biology, were positive about our project. Since our country is characterized by a high fire frequency, they could easily understand the necessity of a practical solution. One of the concerns that was mostly expressed was about the biosafety of our product. Since Europe does not consent to the use of GMOs, people were skeptical about the microorganisms in our project. We wanted to know that the community feels safe with a product like ours, so we took into account every concern and focused even more on increasing the levels of biosafety in our project.

Photograph of our meeting with Mrs.Aristoteli Papageorgiou
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Photograph of our meeting with Mrs.Aristoteli Papageorgiou
American Farm School of Thessaloniki
Who did we visit?

We visited the American Farm School of Thessaloniki, where we interacted with students with a scientific background.

What was the outcome?

We informed the students about the scientific field of synthetic biology and how they could participate in their scientific research through the iGEM competition. We explained to them the different aspects of an iGEM project, and then we focused on our team’s plans for the competition. They were eager to learn about the soil problems after a fire and how we decided to approach the matter. They were curious about the implementation of the hydrogel, and some students were also of the opinion that we interfere with the ecosystem. As we made clear, the product is designated for specific occasions where, due to climate change, the forests cannot recover quickly without human intervention. Our visit finished with a quiz about synthetic biology and questions about our project. It's worth mentioning the exceptional performance of the students and their interest in discussing with us their opinions even after the presentation.

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Photograph of Path Conference
Path Conference
Where did we participate?

We held an information booth at the seminary that was organized by "Path”, a research student team at our university.

What was the outcome of our participation?

Leaflets with information about our team’s actions were the communication tool for our interaction with everyone eager to look into our idea. University students who were also passionate about science, other student teams at our university with similar or completely different interests or professors who were in the STEM field shared with us their thoughts on our proposal. The leaflets made it easy for someone to comprehend the consequences of forest wildfires since many people are not aware of how soil is affected by them.

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A Visit at Katerini School
6th Grade: What did we present?

Firstly, in 6th grade classes, we started by presenting the principles of molecular biology, like teaching about the DNA bases and explaining how they pair. We continued by explaining what iGEM and synthetic biology are, with very easy examples, and we finished with a small talk about the environment and forest fires. We wanted to underline that fires can occur naturally, but the problem is when they happen repeatedly due to human activity and climate change.

What was the kid’s feedback?

Generally, we wanted to reach out to the students in a more interactive way, so during our whole presentation, we were having small discussions with the children so that we could let them express their thoughts and share their knowledge with us. They were all very engaged in the conversation. They agreed unanimously that forest fires are a big problem for our country, and they thought that our solution was very smart and interesting.

Our trivia quiz

In the end, we made sure that the kids had fun with a game. The class was divided into two teams, and one of our team members was asking questions regarding topics already discussed. The first kid from each team to raise their hand would be able to answer the question, and their team would be awarded 1 point if the answer was correct. The team with the most points would be the winner. This game was a great way not only for the kids to learn in a fun way but also for us to see if the most important parts of our presentation came across. We were excited to see that all the students were very competitive and eager to answer our questions. Almost every student that would raise their hand would answer correctly, something that made us content.

Kindergarten: What did we present?

Later, we visited two classes of kindergarteners. Due to their age and since our project focuses on solving some of the fire’s aftermath, we decided to mainly talk to them about the forest fires and their outcomes. So, we read to them a fairytale that we had made ourselves. The story was about a bunny, Milo, who lived happily in a beautiful forest until a wildfire bursted out. We highlighted the problems that Milo had to deal with after the big fire and that only with the help of the rest of the forest animals would he be able to reconstruct their home, the forest. In the end, Milo succeeds, the trees and the soil regenerate, and all his animal friends return. The kids loved our story and listened carefully.

What was kids' feedback?

After the storytelling, we had a small conversation with them to see what they understood from the tale and their opinions about the matter after the forest fires. At last, we asked them to make a drawing. On one side of the paper, they drew a beautiful forest as they imagined it before a fire, and on the other side, they drew the same forest after a wildfire. The results were amazing and showed that the children had a deep understanding of most of the serious consequences of fires. It was vital for us to know that kids could understand the hazards of wildfires to the ecosystem. Not only our talk after the fairytale but also their drawings depicted their thoughts about this matter.

Photograph of our meeting with Mrs.Aristoteli Papageorgiou
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Our podcasts
Our Podcasts
How did we come up with the idea of podcasts?

When we couldn’t decide how to communicate our actions, we thought of creating our podcast to spread knowledge about our project. That’s how we began to work on our podcast with the title "SYNBIO CHRONICLES: Genetically Speaking".

How have we communicated our project?

The first episodes of podcasts were about the comprehension of terms like synthetic biology, iGEM, and our actions as a team. We strongly believe that it is important for someone to be familiar with the meaning of the above words to perceive details like the scientific parts. Apart from explaining the project, the podcasts also gave us the chance to speak about the happenings that inspired us to look into the forest fires. The ecological consequences of the wildfires as well as bioethical issues about the use of synthetic biology products are also topics of discussion for the episodes.

Why did we decide on Greek for our podcasts?

When we searched the term synthetic biology on platforms, we immediately saw the dearth of videos and podcasts in our native language. So, it was really important for us to enable anyone from our country to easily get informed about this matter. Nonetheless, we always make sure to include English subtitles to make our podcasts accessible to anyone interested!

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DNA Day: An Interactive Approach
How have we collaborated with the Greek iGEM teams?

Furthermore, we had prepared, with other Greek iGEM teams, an interrogatory for synthetic biology since we found it interesting to examine on a statistical scale how aware Greek young people are. The number of participants was 329, and here are some of the results of our research.

Since many students weren’t acquainted with synthetic biology and its applications, we wanted to complete our effort to inform them with a leaflet answering the questionnaire as well as some valuable insight into the science of synthetic biology. It was important for the leaflet to be pleasant and easy to read for anyone.

How have we communicated our project?

The first episodes of podcasts were about the comprehension of terms like synthetic biology, iGEM, and our actions as a team. We strongly believe that it is important for someone to be familiar with the meaning of the above words to perceive details like the scientific parts. Apart from explaining the project, the podcasts also gave us the chance to speak about the happenings that inspired us to look into the forest fires. The ecological consequences of the wildfires as well as bioethical issues about the use of synthetic biology products are also topics of discussion for the episodes.

Photograph of our meeting with Mrs.Aristoteli Papageorgiou
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A Visit at High School of Evosmos
Why did we approach them?

High school kids who are interested in learning about science were a great opportunity to gather opinions and questions about our project. We also focused on explaining how iGEM teams work since this group of students wanted to be involved in the competition next year.

What’s the feedback from the students?

We were pleased to see their attention towards our project, Euphoresis, since they asked us many questions about the scientific details. Some terms, like “Quorum sensing” and “kill switch mechanism,” were unprecedented to them, so we made sure that the students were aware of the mechanisms we were using. Their interest in biology made it easy for us to explain the structure of our project. Then we were asked about the implementation of our idea. It was really important to see how young generations view the applications of synthetic biology products in the environment. We could see that there were concerns about the engineered microorganisms and how they would affect the ecosystem, so we informed them about the biocontainment methods we use to minimize this danger.

How did we inform them about the iGEM competition?

We made sure to explain to them our timeline, the tasks of the team, and some projects from the previous year's competition. We wanted them to be aware of the different tracks that they can choose for their project. The kids were notably fascinated with the achievements someone could accomplish through synthetic biology. The teachers of the school also showed the same interest as the students in the details and procedures of iGEM. We are more than happy to inspire the young soon-to-be scientists to fling themselves into synthetic biology, and we wish them the best of luck in creating their iGEM team!

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Thessaloniki International Fair
What is the Thessaloniki International Fair?

It’s a well-known and important event for our city and country in general. Companies, teams, and start-up businesses are invited to participate in the exhibition and spread knowledge about their projects and products.

What was the feedback we received?

We took advantage of this opportunity and found companies that could give us feedback and information about our syn-bio approach. We came in contact with forestry experts who were eager to talk with us about the details of “Euphoresis”. Their opinion on our product is extremely important since the final application of it on the soil is possible only with the guidance of experts from their field of science. We also found many companies that work on the by-products of factories, so we discussed the sustainable aspect of our project. The feedback we got back was very positive since, especially the peels of citrus fruits like oranges, are difficult to discard by-products that can be used in the soil due to their acidity. So, the processing of them for our polymer was found to be an excellent idea from many perspectives.

Photograph of Thessaloniki International Fair
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Athanasios Kalamatas
Who did we contact and why?

We contacted the theologist Athanasios Kalamatas to discuss with him the approach that people from different religious backgrounds would have on our project.

What was his feedback?

Mr Kalamatas informed us about the skepticism that our project would get from a big percentage of religious people. The technological advancements that characterize Synthetic Biology conflicts with the belief that you should not intervene in human nature, which is controlled by a creator. It also raises a lot of bioethical dilemmas on whether or not is beneficial or enhances social injustice and risks nature’s balance.

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Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Dean of the Faculty of Health Sciences
What was the purpose of the encounter?

The loss of natural beauty because of the forest wildfires is indissolubly linked with consequences on human health. Keeping ourselves informed about that aspect of our project was as important as any other feedback. For that reason, we got in touch with the dean of the faculty of health sciences at Aristotle University of Thessaloniki, Professor Theodoros Dardavesi.

What was his point of view?

Our attempt to provide a solution for the restoration of burned lands touched him, and he appreciated our approach to the field of health. He pointed out how the increased forest loss, especially in the last few years, has significantly impacted mental welfare and how important it is to expand our project and look into the connection between the environment and human health.

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Interdisciplinary Centre for Agri-Food
Who did we meet with?

We met with the board of directors of the Interdisciplinary Centre for Agri-Food. This center consists of researchers that specialize in agri-food and each one of them comes from different scientific fields. Due to their subject of work we got in touch with them to collect more information about our hydrogel.

What was their feedback?

Everyone was impressed with our idea and was willing to help us by providing their own lab facilities. They also guided us to look for some information we hadn’t thought about. For example, Dr Mourtzinos Ioannis, professor at the department of Agriculture and I.C.AGRO member, suggested that we collect data and statistics about which citrus peels, containing sufficient amounts of pectin, are mostly discarded and not used, in order for us to choose an option that would comply with the circular economy values. Lastly, Mrs. Menkisoglou-Spiroudi professor at the department of Agriculture and head of I.C.AGRO, highlighted the importance of the right growth medium inside our hydrogel that would last enough time for our microorganisms, so that they wouldn’t start to eat away our biopolymer.

Photograph of our meeting with Mr Mourtzinos
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Photograph of our meeting with Biosolids
Biosolids
Who did we contact and why?

We contacted “Biosolids”, a company that produces soil conditioners out of compost procedures. We met with MsH Evangelos Papaioannou an Environmentalist and Forester Scientist from the Department of Waste Management.

What was his feedback?

He considered our idea really novel and creative. According to his experience on food industry waste he pointed out that we would have a lot of available sources for providence orange peels. He also stated that our idea is essential to be applied in burned forests, but not in the immediate post-fire period, and especially in double burnt terrains. Finally, from his experience in soil conditioners, Mr Papaioanou supported that our idea could be used in areas that are threatened of flooding, too.

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Ministry of Environment and Energy
Why did we communicate with the Ministry of Environment and Energy?

It was essential to get in touch with stakeholders and receive feedback from their point of view for post-fire restoration. For that reason, we contacted the General Director of Environmental Policy of the Ministry of Environment and Energy, Kostas Dimopoulos.

What was his overall opinion and concern?

During our Zoom call, he confirmed the severity of the soil’s increased hydrophobicity after a forest fire, as it intensifies the threat of soil erosion. He also highlighted—as we had already been informed by the forestry departments—that there is no other way of dealing with this matter apart from the tree trunks. He was a bit reluctant with our proposal to include seeds inside of our material because, from his experience, sowing reforestation has a low success rate (5–10%), in contrast to classic reforestation with seed tree planting. But, as we explained, we hope that the environment we create inside the hydrogel for seed development will increase the success rate in comparison with previous attempts. He expressed his concerns regarding the cost of the production of our material in large quantities. Summing up, he was supportive and held a strong belief that a well-designed implementation of our project could address critical issues faced by numerous Greek forests.

Photograph of our meeting with Ministry of Environment and Energy
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Photograph of our meeting with Rector of the Aristotle University of Thessaloniki
Rector of the Aristotle University of Thessaloniki
What was the goal of the meeting?

Among the target groups we approached to communicate our project, our university was one of our priorities. So, this time we came in contact with the Rector of the Aristotle University of Thessaloniki, Professor Koveos Dimitrios, to listen to his opinion about “Euphoresis”.

What have we discussed?

The subject of discussion with Rector Koveos Dimitrios was focused on the future of our project. We talked about the possibility of scaling up and the experimental stage of our product at the moment. We made sure to analyze the further modifications and lab tests our project would need in case of actual application in the forest lands. He was glad to see that we have considered the parameters for a possibility like that and he advised us, for future implementation, to define the economic cost and the quantity we would need approximately in a forest. In this way, we are going to be prepared for our moves after the competition regarding production at a scale-up level.

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Hellenic Biosafety Society
Who did we contact, and why?

The level of biosafety in our project was one of our main concerns, as we had to ensure that the final product was not hazardous to the environment. So, we contacted Mr Dionisios Vourtsis, the President of the Hellenic Biosafety Society, to share our thoughts about the issue of biosafety.

What was his advice?

He informed us that a holistic biosafety assessment of our project includes the conduct of risk assessments (possibility x severity) on each part of our project. Even though we were more focused on the microorganisms because of their genetic modification, Mr Vourtsis informed us that we should also take into consideration the polysaccharides of the hydrogel. Summing up, the risk assessments should refer to the microorganisms, polysaccharides, biology reagents, lab waste, project waste (what is left after the degradation of our product), and the toxins that are produced by the bacteria. The help of Mr Vourtis was really valuable in order for us to come closer to biosafety processes and have a complete picture of the risks of our project.

Photograph of our meeting with Mr Vourtsis
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EU GMO Regulations
Who did we contact, and why?

We contacted Professor Nils Rostoks for his position as Vice Chair in the panel for Genetically Modified Organisms Regulations in the European Union because we wanted his consultation on the legislation issues in the EU regarding the implementation of our project.

What have we learned about the legislative context?

Professor Rostoks informed us that our project falls under category 4 according to the EFSA guidance because it is a product consisting of or containing GMMs capable of multiplication or transferring genes. For our project to be applied right now in the EU countries, it should be modified to fall under category 1. Ideally, for European Commission standards, we should use genes from the same species for modification and not include antibiotic-resistant genes in our design, as this extends the antibiotic resistance problem.

Moreover, we discussed the new legislation proposal about GMOs that was submitted in 2023 and aims to include the new genomic techniques (NGTs), which are defined as techniques of genetic manipulation that have emerged or developed after 2001 (like genome editing techniques such as CRISPR-Cas or in vivo mutagenesis techniques such as EvolvR, SCRaMbLE, and epigenetic techniques such as DNA methylation, miRNA, etc.). Even if, in the new context, we have more freedom to redesign our project and for it to be applicable from a legal aspect, Professor Rostoks pointed out that the process of changing the regulation will take some years.

What was his feedback on our project?

The professor acknowledged the significance of the problem we approached and was supportive, even though there are restrictions due to legislation. However, his main apprehension was about the efficiency of the kill-switch mechanism we had designed. We asserted that for an actual application in the forest soil, there should be more extended and advanced experiments.

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Biosafety Seminar

Biosafety plays an important role in our life as iGEMers and as young scientists. Unfortunately, not a lot is known about this matter through the undergraduate students. Since, due to our project, we would work with GMOs and other genetic material we wanted to be as informed as possible regarding the safety of the products we use and the proper way to discard them. So, we propose to Professor Lampropoulou Dimitra, to participate in a seminar educating us about the importance of biosafety and the measures our university takes to ensure it.

The biosafety seminar content

Dr Lampropoulou Showed us a really insightful presentation. She talked about the different levels of safety different products belong to. She explained the way we should discard every different substance we use in our laboratory and how our university later discards all this waste safely. After this seminar we were all up to date about the current legislation regarding lab waste and how to retain safety during and after our lab work.

Photograph of our Biosafety seminar
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Photograph of our meeting with Deputy Regional Governor of Thessaloniki
Deputy Regional Governor of Thessaloniki
Why did we interact with the Deputy Regional Governor of Thessaloniki?

Mrs. Voula Patoulidou, Deputy Regional Governor of Thessaloniki, holds a key position in Central Macedonia’s sustainable development. So, discussing with her was the best way to comprehend how our project can be implemented in our city.

How can we extend the application of our project?

According to Mrs. Patoulidou, it's important to take into account the needs of our community. As she pointed out, we have to keep in mind the importance of individual responsibility. A scientist, like any other civilian, should not be isolated from society but should participate and try to contribute to political, societal, economic, and environmental progress. Her suggestion was the modification of our project to incorporate it into programs that are opposed to intense urbanization and promote sustainable and green cities.

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Closing the loop

The feedback from different communities was equally important with the advice from experts for the scientific design of our project. Through the year, we redesigned our project multiple times and we always ensured that we were aware of the needs and concerns for the solution we provide.

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Photograph of our Human Practices
Noesis Science Center and Technology Museum
Where did we participate?

It was our pleasure to participate in the “Astroparty” in the Noesis-Planetarium, where we presented our project through interactive actions for the different target groups in the event.

What was the outcome?

At this point, the final version of our project was formed. So, the outreach to people included the explanation of the mindset behind our idea, from the stage of brainstorming until now. For the enthusiasts who wanted to get to know our actions, we had a booth with activities for children, like a sustainability board game. Sustainability is invisible from our project, and we think it's significant to communicate our goals for sustainable development and raise awareness among children regarding this topic. Our promotion video and leaflets attracted many experts with different specialties. They mainly discussed with us about the specific technique we chose to produce our hydrogel and achieve soil restoration.

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Vice Dean of Aristotle University of Thessaloniki
Who did we meet with?

We came in contact with Dr Efstratios Stilianidis, Vice Dean of the Aristotle University of Thessaloniki, who was intrigued by learning about our syn-bio approach to the burned soil.

What was his overall feedback on our project?

He was very happy to hear such an innovative idea coming from a team belonging to our university. He believes that our product is really up-to-date, especially due to the phenomenon of climate change. He advised us to really stress the fact that our biomaterial derives from food waste and follows the circular economy, something extremely important in these days and age. What is more, he suggested that he supports us with the funds we need since he believes that our project would not only be successful in the competition, but it will solve many crucial environmental problems if it continues its development after it.

Photograph of our meeting Vice Dean of Aristotle University of Thessaloniki
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Photograph of our social media
Our Social Media
How have we used the power of social media?

The platforms today give you the power to communicate with anyone, even from the other side of the world. So, through our social media accounts, everyone could express their opinion on our project. Every comment or proposal for improvement is useful for us to consider for the completion of our idea, especially for the ecological outgrowths of it.

How did we receive feedback through social media?

We took advantage of the options the platforms offer, like quizzes and Q&A (questions and answers), to interact with everyone willing to look into our project. The quizzes were a fun way to educate people about scientific information, like the strains of the microorganisms we are using and the effects of the wildfires. On the other hand, the Q&A makes it easy to see the concerns that arise for our project. It’s a great chance to answer questions and simultaneously get feedback to improve the feasibility of our idea.

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Researcher's Night
What was the event at which we participated?

Our team was part of the researcher’s night event, where we had the chance to interact with people who find science amusing and desire to gain knowledge.

What were our actions?

We had prepared easy and simple experiments to promote environmental values that are related to our project. In the first one, we used leaves from different trees that we put into water and observed the bubbles that were created from the production of oxygen. We explained to everyone who stopped by our stand the procedure of the leaves breathing, and we pointed out how this experiment is plain proof of the significance of flora. Then, we focused on the soil by comparing two pots: one of them had a plant, while the other one had just soil. By pouring water on the pots, it was obvious how much the roots of plants increase water absorption. After the experiment, we communicated our project inspiration about the hydrophobicity of the soil and the results of water run-off and floods after the forest fires. We were glad to see people comprehending our project and our goals through the experiments.

Mednight Video

After taking part in the researcher’s night in Thessaloniki we had the opportunity to be a part of Mednight! Mednight is a project created by Researcher’s Night Europe. This project aims to give the opportunity to many experts and professors coming from Mediterranean countries to spread their knowledge and share their opinion about certain subjects. So, we made a video describing our project in a comprehensive way and in English language, so that everyone that would come across it would get the opportunity to learn about our innovative idea.

Photograph of Researcher’s Night
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Photograph of our meeting with Deputy Regional Governor of Thessaloniki
Our Photo Exhibition
One picture is a thousand words!

After almost one year of researching the matter of wildfires and experiencing the problem first hand due to the destructive fires of 2023 we wanted, as a last activity ,to share the serious consequences of the uncontrollable wildfires on the soil. So, we held a picture exhibition regarding the most important fires our country had to face. We printed photos of places before and after destructive wildfires that depicted the disturbance of the ecosystem. We chose to exhibit these pictures in the school of agriculture and forestry from our university. We wanted to get the feedback from students more related to the matter of wildfires.

What was the feedback?

The university students were all very interested in our activities. We informed them about the impact the fires had on the depicted places and explained our project and its necessity. Most of them were positive towards it and congratulated us on our proposal. On the other hand, some of them were a bit hesitant since they were more familiar with the practices of natural regeneration. We clearly explained the reasons why natural regeneration sometimes is impossible and that’s when our project comes as a solution. With a lot of discussion even the hardest to convince students believed that our proposal is necessary.

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Dr Effimia Papatheodorou
Why we approached Dr Effimia Papatheodorou?

Dr Papatheodorou is a professor at the school of biology at Aristotle University of Thessaloniki who specializes in soil microbiology gave us important feedback in the stage of brainstorming.

What was her feedback?

She shared with us the enthusiasm for the final product, and she commented that we have incorporated her advice the best way possible. She encouraged us to extend our experiments in the future in order to test the biopolymer in real soil conditions.

Our meeting with professor Papatheodorou
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Photograph of our meeting with Dr Yiangou
Dr Yiangou Minas
Who did we approach and why?

Dr Yiangou Minas is a professor in the department of Biology at the Aristotle University of Thessaloniki, and his field of science refers to molecular biology and immunobiology. His interest in the law of biology was a great reason to discuss our concerns with him.

What was the outcome of our encounter?

As we were aware, the laws in Greece forbid GMOs, an indivisible part of our project. Although there were limitations because of the legislature, he supported the opinion that we had approached the issue of biosafety correctly. The kill switch mechanisms that are incorporated and the antimicrobial peptide in our hydrogel respond to the biosafety requirements quite efficiently. We also discussed with him the dilemma of whether it’s the right choice to interfere in the forests. Nevertheless, as Dr Yiangou claimed, when there is no other solution, we have to be open-minded to proposals, like our project, that give the answer to the problem.

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Dr Aravanopoulos Filippos
Who did we approach and why?

Professor Aravanopoulos at the School of Forestry and Natural Environment at the Aristotle University of Thessaloniki, shared his opinion about the origin of the seeds that will be inserted inside the hydrogel.

What is the feedback we got back?

Professor Aravanopoulos informed us about the process of natural reforestation, and he immediately agreed that human intervention in forests is inevitable in some cases. He also reminded us that the most important parameter that we have to keep in mind is the seed’s origin. The best scenario to ensure environmental conservation would be that the seeds used for the reforestation of a burned forest would come from the same forest. The endemic species must be considered when there are no seeds available in the local forests.

Photograph of our meeting with Dr Aravanopoulos
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The tree of human practices
Figure 1: Roots of Integrated Human Practices

Overview

Even though we explored multiple environmental challenges, the forest fires and the increased incidents in our country caught our eye from the start. Therefore, from our research through the literature, we slowly began to comprehend the consequences of the forest fires and the increased danger of environmental disasters, like desertification. Deciding on how our project could be shaped in order to accelerate and ensure forest recovery through synthetic biology has not been an easy process. We began our research learning about the consequences of wildfires. The reduction in soil nutrients, the ash, the loss of trees, and the soil conditions after a wildfire were all scattered information that we attempted to combine without result. Outreach to the scientific community was the key to finally figuring out the interconnection between the various consequences of wildfires. Conversations with professors and constant bibliography research have resulted in the gradual development of our project idea.

Workflow of integrated human practices
Figure 2: Workflow of our integrated human practices

Complexity is one of the characteristics of our project. The multiple levels of the idea required a well-planned workflow to develop Euphoresis step by step with the guidance of experts and professionals.


Diving into The Problem

Who did we address and why?

We contacted Associate Professor Evagelia Golia at Aristotle University of Thessaloniki, in the School of Agriculture, because of her specialty in soil science and soil chemistry.

What was the subject of discussion?

A concern of Mrs. Golia for our idea to focus on the soil after a fire was the characteristics of the soil depending on the area, like the pH. Her advice was to start by investigating the differences between a wildfire and an urban area fire. We can then specify our project and offer a more comprehensive solution.

Ηow have we incorporated their feedback?

Forest wildfires were the focus of attention from the start, so with additional research, we were able to distinguish the differences that Dr Golia mentioned. Her advice was valuable in helping us design and finalize the objectives of our project.

Photograph of Mrs.Golia
Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Who did we address and why?

We got in touch with Dr. Giorgos Zalidis, Professor Agricultural Science Department of Aristotle University of Thessaloniki who specializes in soil science.

What was the subject of discussion?

Our goal was to identify the most serious issue that forest soils face following a fire. In our conversation, he pointed out that some major issues after a fire are the lack of organic matter and the increased hydrophobicity of the soil. More specifically, organic matter gets destroyed since it is one of the top layers of the soil, which makes it more prone to getting burned. At the same time, the contact angle between the soil and the water changes, removing its ability to absorb large amounts of water, which heightens the hazard of soil desertification. We were informed that ionic resins in the form of spray are currently being used to reduce the latter problem.

Ηow have we incorporated their feedback?

With Dr Zalidis knowledge, we had acquired the guidance we needed to continue our research and construct an idea that would efficiently solve the most crucial issues forests are facing after a wildfire. With the information he gave us about the ionic resins, we began bibliographic research in order to find a more effective alternative.

Project update

From now on, our primary literature interest will be a synthetic-biology solution to the burned soil's hydrophobicity. The water-runoff increases the danger of soil erosion and, finally, the desertification of forest ecosystems. The initial phase of our project involved developing a hydrogel-forming biopolymer to ensure water absorption. Then we looked into the soil's requirements in terms of nutrients that are lost.

Who did we address and why?

We contacted Professor Dimitrakopoulos Alexandros from the school of Forestry and Natural Environment at Aristotle University of Thessaloniki.

What was the subject of discussion?

Given that he is a researcher who is interested in forest fires, his advice was extremely helpful to us in understanding the changes in the soil. He even gave us a copy of a book he had written that discussed soil organic matter, inorganic elements, and the impact of fire density on soil conditions. We discussed the phenol-induced hydrophobic layer that can form 2–5 cm below the soil in some situations after a fire. The hydrophobic layer, which can last even for a year after the fire, prevents water absorption and results in the runoff of the water. He also mentioned that the lack of organic matter is also a cause for soil erosion, so he encouraged us to look into organic matter that is necessary for the plant's development as well.

Ηow have we incorporated their feedback?

The conversation with Professor Dimitrakopoulos gave us insight into the breakdown of substances like lignin that soil microorganisms can use. The pH and the inorganic nutrients are also affected. The pH of the forest soil is, in general, slightly acidic, and after a fire, it increases for a period of time. This information assisted us in designing the experiments to simulate the conditions of the soil when we would test our hydrogel. Also, he advised us to focus on the enrichment of nitrogen and not other inorganic compounds since nitrogen is significantly reduced after a fire, and if we are able to increase it through the use of microorganisms, we would help with the fertilization of soil. He also suggested using planes or drones for the application of our hydrogel in order to make it easier to use in large areas.

Photograph of our meeting with Professor Dimitrakopoulos
Photograph of our meeting with Professor Papatheodorou
Who did we address and why?

Dr. Effimia Papaptheodorou is a professor at the school of biology at Aristotle University of Thessaloniki who specializes in soil microbiology.

What was the subject of discussion?

Like other professors, she emphasized the crucial role of organic matter in the soil’s fertility and health and how important it is for the plant’s growth. Moreover, she helped us understand the techniques that are being followed in the present for the prevention of soil loss. Specifically, after the fire and before the procedure of reforestation, they use tree trunks placed in parallel structures in order to keep the ground stable. Without the use of tree trunks, there is an increased danger for the upper layer of soil to be lost due to the water runoff that follows a rainfall. So, considering the methods that are used today, we were really excited to discover that our project would be the first approach for recovering burnt soil through synthetic biology.

Ηow have we incorporated their feedback?

Compared to the current solutions, she was positive that the idea of the biopolymer could actually be implemented on occasions crucial for the soil. After research and according to Dr Papatheothorou's instructions, we found out the advantages of the degradation of phenolic hydrophobic compounds. The breakdown of these compounds is useful for the forest since the products can be utilized by the soil microorganisms.

Project update

After the encounter with the experts, we decided that we were going to focus on the phenolic, hydrophobic substances, such as lignin-like compounds. The problem with nitrogen and organic compounds in soil after a forest fire is their low bioavailability. As a result, our microorganisms that will be incorporated into the project will contribute to the enrichment of the soil with nutrients essential for soil restoration. Furthermore, an idea of ours was the addition of seeds inside the hydrogel matrix to accelerate the process of reforestation.

Who did we address and why?

We came in contact with Dr Maria Doussi from the department of biology at the National and Kapodistrian University of Athens because of her research interests in post-fire regeneration of Mediterranean vegetation.

What was the subject of discussion?

According to her scientific experience, most of the endemic plant species in Mediterranean countries are able to regenerate with the soil seed banks that they create. In some cases, the fire actually enhances the seeds’ growth. This happens because the seed coat of the ground seeds burns, and their growth is enhanced. In her opinion, we have to interfere by adding seeds only in cases of repetitive fires where all the available seeds have been destroyed and natural regeneration is impossible. Dr. Doussi also pointed out that currently, the process of reforestation includes plant species that cannot survive in Greece’s summer climate (ex. oak trees) because they are less flammable.

Ηow have we incorporated their feedback?

After the valuable feedback from Dr Doussi, we understood the need to add seeds to the hydrogel in specific situations. Even the current techniques of reforestation don't have the ideal success rate. So, in cases of repetitive fires, where the seeds are not available in the soil, our project could work as a reforestation product.

Project update

After forming the basic levels of our project, biopolymer-microorganisms-seeds, we reached out to more scientists and delved deeper to design more specifically the parts, starting from the hydrogel.

Hydrogel

Who did we address and why?

After concluding to the hydrogel, the first part of the solution we were trying to provide, we then started researching the possible nature of the material. At first, we were thinking about creating a protein-based hydrogel. So, we decided to reach out to Akilla Ravikumar, a former iGEM member from the 2022 UCopenhagen team. Since they worked on creating a biopolymer using proteins, we were sure that her knowledge and experience of her would be very important.

What was the subject of discussion?

When we started researching the possible nature of the material, we wanted to share our thoughts with Akilla since she has experience on protein-based biopolymer from the previous year's iGEM competition. She supported our idea for a hydrogel that consists of proteins, and she informed us that the hydrogel would not only be able to encapsulate microorganisms, but it would have a high mechanical strength too. She also encouraged us to create multiple layers into our product to heighten its strength even more. Additionally, one of her very first pieces of advice was to use a polymer that has already worked for someone else’s project. In this way, even if we didn’t have the time to test its properties, we would still have enough data from bibliography to support our proof of concept. As for negative feedback, she warned us that turning the proteins into fiber and the spinning process would be the most difficult and time-consuming parts of our project.

Ηow have we incorporated their feedback?

Even though her guidance was really helpful we decided against the use of proteins for our hydrogel, because we were advised by a lot of specialists that this type of material would be really difficult and time consuming to produce. Also, the cost of our product would increase, resulting in difficulties in the case of implementation.In the end, we chose to utilize polysaccharides deriving from food companies' waste.

Photograph of our meeting with Akilla Ravikumar
Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Who did we address and why?

Dr Pantazaki Anastasia is a professor at the school of chemistry at Aristotle University of Thessaloniki.

What was the subject of discussion?

Our initial plan was to produce our monomers with the help of bacteria in the laboratory. But Mrs. Pantazaki explained to us that this scenario has disadvantages, like the extent of time required for the production and the low quality and quantity.. Additionally, the cost of the biopolymer would be significantly high, and our final product would be difficult to use, especially in large areas like forests.

Ηow have we incorporated their feedback?

As a result, we decided that we would have to find another source of production for the monomers of the hydrogel. The chemical processing of the monomers was the best solution to give them the desired characteristics. Therefore, our final product would be as affordable as possible and the problems in the lab, for the hydrogel, would be limited in comparison with our initial thoughts.Lastly, we talked about the biosafety of our project regarding the microorganisms and specifically how they would be trapped inside our hydrogel in order not to escape into the environment. A discussion that also made us think about other biocontainment strategies like kill switches.

Project update

At the start, we thought that the protein monomers would be ideal for the hydrogel but we also wanted to include the bacterial production of the monomers in the laboratory. After feedback from the scientific community, this idea was soon rejected to avoid certain difficulties and be in accordance with our timeline.

Who did we address and why?

We contacted Prof. Dimitris L. Bouranis, Head of Plant Physiology and Morphology Laboratory of the Crop Science Department at the Agricultural University of Athens.

What was the subject of discussion?

Dr Bouranis suggested the use of materials that could be assimilated by the soil, like multi-branch polysaccharides or proteins from plant cells, for our biopolymer. More specifically, he informed us that each root axis produces pectin-type polymeric materials around its tip, which have a significant functional role. They protect the young tip of the root as it penetrates the hard soil environment; they aid in hydration because of their ability to retain water; and they naturally facilitate the diffusion of water-soluble components to the root that happen to be dissolved in the territorial system at that time. The action of those materials has a direct correlation with the action of our hydrogel.

Photograph of our meeting with Dr. Bouranis
Photograph of our meeting with Dr. Georgakilas
Who did we address and why?

We contacted Professor Alexandros Georgakilas at National Technical University of Athens, in the School of Applied Mathematical and Physical Sciences, in the Department of Physics.

What was the subject of discussion?

He helped us make a plan for the design and model of our hydrogel. At first, we discussed the toxic substances like polyacrylamide in synthetic polymeric hydrogels. His suggestion was to create our hydrogel from materials compatible with the environment and mechanically stable so that it could be applied to the soil. More specifically, to achieve those two goals, he suggested looking for substances that are being produced by plants, and he pointed out the use of polysaccharides. Overall, his remarks about the design of our hydrogel were to test the viability of our material, its mechanical stability, and the way that our hydrogel will affect the soil conditions.

Ηow have we incorporated their feedback?

After those two meetings, we decided to look more thoroughly into the materials that are constructive parts of plant cells and continued by focusing more on polysaccharides, with the required properties being their high swelling ability, mechanical stability, and compatibility with the soil conditions.

Who did we address and why?

Dr Chatzidoukas Christos is a professor of Chemical Engineering at Aristotle University of Thessaloniki.

What was the subject of discussion?

In our conversation, we asked for his opinion on producing bacterial proteins ourselves to create our biopolymer. He was very negative about this prospect and explained that this kind of work would not only be extremely time consuming, but very risky as well. Instead, he proposed looking more into the possibility of using polysaccharides derived from industrial waste. He underlined that through his experience, he has concluded that pectin is a very hydrophilic molecule, and since it exists in orange peels in high percentages (20-25%) it would make a very suitable candidate for our project

Ηow have we incorporated their feedback?

After our meeting, we conducted thorough bibliographic research and concluded that pectin would be one of the polysaccharides that we would use. Furthermore, we decided that in our project we would utilize the waste of orange juice companies since the peels contain large amounts of pectin and most of the time are just discarded.

Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Photograph of Prof. Bikiaris
Who did we address and why?

Dr. Mpikiaris Dimitrios is a professor at the Department of Chemistry of the Aristotle University of Thessaloniki and specializes in the chemistry and technology of polymers.

What was the subject of discussion?

We were researching an ideal compound to create our hydrogel. We met with Dr Mpikiaris due to his specialty in biopolymers. Through our discussion, we expressed the properties our hydrogel would like to have and the compound we would use to make it. Mr. Mpikiaris proposed we use chitosan, modified chitin. This polysaccharide has antimicrobial properties, is biodegradable, and is easy to blend with other polysaccharides and proteins. All these characteristics made this polysaccharide suitable for our polymer.

Ηow have we incorporated their feedback?

Following his suggestion, we looked more into the chitosan’s properties. We concluded that, due to its excellent characteristics and ability to create stable crosslinking with pectin, the other polysaccharide we had already chosen would be one of the compounds consisting of the hydrogel.

Who did we address and why?

Dr Nektaria Barkoula is a professor at the department of Materials Science Engineering at the University of Ioannina.

What was the subject of discussion?

Her feedback about our hydrogel was important. She informed us that chemical crosslinking could extend the material’s lifespan,so our decision about the crosslinking between pectin and chitosan was a great choice. In addition, she stated that chitosan in general is an expensive material with a large heterogeneity. The different extraction methods could result in products with lots of different characteristics. About the experimental part, she suggested that we should test our by-copolymer not only in different pH ranges but also at different temperatures.

Ηow have we incorporated their feedback?

Our interaction with Dr Barkoula gave us the reassurance we needed about the type of crosslinking we chose. What is more, after her suggestion, we included in our experimental design the testing of the hydrogel at two different pHs (5,5, and 7,2).

Photograph of our meeting with Dr. Barkoula
Photograph of Ioanna Koumentakou
Who did we address and why?

We met with Ioanna Koumentakou, a PhD candidate at the department of Chemistry at Aristotle University of Thessaloniki.

What was the subject of discussion?

We wanted to ensure that our hydrogel would prevent the microorganisms from escaping it, so that we could increase the biosafety of our product. Mrs Koumentakou proposed that the ideal way to achieve that would be by enclosing the microorganisms inside microspheres. These spheres would have the suitable pore size to retain the microorganisms inside them but would allow the substance they produce to escape from the material and be distributed to the soil. She suggested using alginate and pectin for the creation of the microspheres since she believes these compounds were the most ideal ones, due to the pore size they create.

Ηow have we incorporated her feedback?

After her consultation and some bibliographic research, we ended up using the suggested microspheres using alginate and pectin. The encapsulation of the microorganisms was also the ideal way to create a specific environment for the microorganisms to survive inside the hydrogel.

Project update

After literature research and the guidance of the professors, the basic design of the hydrogel was completed. Pectin and chitosan were τhe polysaccharides that fitted our project the most in order to transfuse the desired characteristics to the hydrogel. As for the microorganisms, their encapsulation will be done into microspheres of alginate pectin. The next challenge we faced was the selection of the right strains of the microorganisms.



Microorganisms

Who did we address and why?

We talked with Professor Tsikou Daniella from the University of Thessaly, who specializes in the subject of plant molecular and developmental biology.

What was the subject of discussion?

After we gave her an explanation of our concept, she was able to inform us of the requirements for the forest following a fire. Then we addressed the part of our project that involves the use of enzymes to degrade phenolic compounds. However, as we discussed with Mrs. Tsikou, we were having trouble choosing between fungi and bacteria after having seen the advantages and disadvantages of both in our literature research for different types of microorganisms.

Ηow have we incorporated their feedback?

Dr Tsikou immediately advised against using fungi in our project since we would find trouble engineering them in the laboratory. She has found that working with bacteria is simpler and faster than working with fungi in her experiments. We therefore concluded that the bacterial strains were a better idea.

Photograph of Prof. Tsikou
Photograph of our meeting with Professor Mossialos
Who did we address and why?

We contacted Associate Professor Dimitrios Mossialos at University of Thessaly, because of his specialty in the field of Microbial Biotechnology.

What was the subject of discussion?

Dr. Mossialos suggested that we investigate the nutrients that are still present in the area after a fire, determine whether they are in a form that is useful to organisms, and modify the microorganisms to aid in their degradation. He also recommended being careful with the selection of the type of microorganisms regarding their genetic plasticity and considering the possibility of creating a genetic pathway. Overall, he considers our idea of preserving and improving the soil to be interesting and novel.

Ηow have we incorporated their feedback?

We took great care to consider the genetic plasticity of the strain of the microorganisms we were going to engineer. After hearing his suggestions, we chose to transform a strain of Bacillus subtilis, a common microorganism in biology, with standard protocols. In that way, we ensured that we had limited problems during the experiments.

Who did we address and why?

Dr Gkelis Spyros, professor at department of Biology at Aristotle University of Thessaloniki.

What was the subject of discussion?

While conducting bibliographic research we stumbled upon a particular type of microorganism: the cyanobacterium. These microbiomes seemed suitable for our cause, due to their characteristics. Because we wanted to understand this complex strain even more, we met with Mr Gkelis. He told us that cyanobacteria are durable photosynthetic organisms that they can nitrogen fixate. They accumulate atmospheric nitrogen and release it in bioavailable for the plant forms.

Ηow have we incorporated their feedback?

After our conversation and more bibliographic research we ended up choosing the cyanobacteria as the second strain we would include into our hydrogel. This strain was ideal for the enrichment of the soil with nitrogen, a very important element drastically reduced after a fire. Due to Dr Gkelis specialty in cyanobacteria and his help with literature research we decided to make him a part of our team as the secondary PI.

Photograph of Dr Gkelis
Photograph of our meeting with Dr Gkelis
Who did we address and why?

We reached out to Mr. Giannakopoulos Christos, a M.Sc. in Biotechnology.

What was the subject of discussion?

One of our concerns was the survival of cyanobacteria, the second of our project's two strains, inside the biopolymer. He reassured us during our meeting that, although cyanobacteria are mostly aquatic microorganisms, they might flourish in our hydrogel due to its moist environment. We also sought his opinion on the inclusion of a kill switch mechanism to limit the possibility of their release into the environment. Despite the fact that cyanobacteria typically cannot survive in soil, he advised further research into the kill switch in case the cells end up in an aquatic environment.

Ηow have we incorporated their feedback?

We were able to continue our project thanks to his advice, so the cyanobacteria were destined to be encapsulated inside the microspheres along with Bacillus subtilis. Concerning the kill switch mechanism, we determined that a communication molecule from Bacillus subtilis will induce the kill switch of cyanobacteria cells. Other kill switch mechanisms we discussed with him, such as light-activated kill switches, were not feasible for our project.

Project update

At this point, we had chosen the strains of microorganisms that we planned to engineer. The strain of Bacillus subtilis will be transformed to overexpress the enzyme laccase, and the cyanobacteria will be genetically modified to provide the soil with bioavailable forms of nitrogen.

Who did we address and why?

Dr Katherine Maria Pappa, who specializes in bacterial molecular genetics, is from the department of Biology at the National and Kapodistrian University of Athens.

What was the subject of discussion?

Dr Pappa’s knowledge of the benefits of fungi and bacteria enzymes aided us in selecting them for our project. She specifically pointed out the white rot fungi as the best strains for the degradation of phenolic compounds. However, she warned us about the difficulties we would face in the lab because the expression of fungi genes in bacterial strains can be tricky. So, despite their superior performance, fungi enzymes have a lower success rate if we choose to work with them.

Ηow have we incorporated their feedback?

After Dr Pappa’s encouragement, we decided to use a bacterial sequence for the expression of laccase in order to maximize the potential for the production of laccase. She was also quick to assure us that the enzymes from bacteria are also effective enough that we wouldn’t have to be concerned about the degradation rate of the phenolic hydrophobic compounds.

Photograph of our Mrs. Pappa
Photograph of our meeting with Dr Karpouzas
Who did we address and why?

We contacted Dr. Karpouzas Dimitrios, a professor from the Biochemistry and Biotechnology Department of Thessaly.

What was the subject of discussion?

Specifically, we explained to him that we had trouble finding what molecule was going to be the input of our kill switch since our bacteria live in (the very limited environment) of the microspheres inside the hydrogel. The biosafety of our project, as we mentioned to him, was one of our priorities to prevent any accidents from the release of a GMO in the forest soil.

Ηow have we incorporated their feedback?

After explicitly discussing our project, Dr Karpouzas advised us to search for an input molecule in the soil. In this way, our bacteria will not have any chance of surviving underground when our system degrades and they are released. However, we were concerned about our cyanobacteria dying due to this specific mechanism. Under normal circumstances, cyanobacteria cannot survive in soil. Regardless, if the cyanobacteria ended up in a lake or river near a forest, there would be a problem. As aquatic microorganisms, cyanobacteria survive in such environments, so in such a scenario, we would have to deal with the development of genetically engineered microorganisms in the ecosystem. To secure our system, we decided to program the death of our strains in the microspheres before they escaped into the environment. Dr Karpouzas also provided guidance for our lab experiments on quorum sensing in bacteria, noting that we should be very careful with the population ratio of our microorganisms to ensure that our system would work.

Project update

Diving further into the design of the project, we proceeded to find the most suitable sequence of the enzyme of lacasse. In relation to the soil conditions and the requirements for the excellent performance of the enzyme, like the pH range, we concluded a bacterial sequence. Simultaneously, we designed the kill switch system which combines the induction of a molecule within the growth medium with a quorum sensing system that allows communication between the two strains of microorganisms.

Seeds

Who did we address and why?

We decided to contact Dr. Vlachonasios Konstantinos, Professor of Plant Molecular Physiology, at the department of biology at the Aristotle University of Thessaloniki.

What was the subject of discussion?

During our meeting with him, we talked more about the idea of using genetically engineered (GMO) seeds in our project. First, he explained to us the laws governing the use of GMOs in Europe and the United States, as well as how they are prohibited in our country and throughout Europe, which made us reconsider the engineering. Dr Vlachonasios was then able to provide us with additional information about the seeds' characteristics. He specifically guided us on how we should choose an endemic species that we can genetically interfere with easily and that is resistant to fire, and he also gave us the important information that seeds can easily survive even in 4% humidity. He pointed out that if we were successful in engineering the seeds, our product would be ideal for forests that had been burned twice in a short period of time, a common occurrence in our country, because the forest would be unable to recover without human intervention.

Ηow have we incorporated their feedback?

After Dr Vlachonasios’s helpful advice, we focused on the seeds’ characteristics, like the utilization efficiency of the water and the growth rate of the plant. Our initial plan was for the seed to survive in dry lands, but the professor confirmed that the specific engineering of the seeds would not be as useful as we thought.

Photograph of our meeting with Professor Vlachonasios
Photograph of our meeting with Professor Polidoras
Who did we address and why?

We contacted Professor Alexios N. Polidoros at Aristotle University of Thessaloniki, in the School of Agriculture, Head of the “Genetics and Plant Breeding Lab”.

What was the subject of discussion?

According to his scientific opinion, the successful, scientifically proven modification of forest plants requires a lot more time than the few months that we had available. His advice was to stay focused on the modification of microorganisms and improve our project regarding the other levels.

Who did we address and why?

We contacted Associate Professor Kosmas Charalampidis of Molecular Plant Development at the National and Kapodistrian University of Athens in the Biology Department.

What was the subject of discussion?

He was reluctant and claimed that we lacked the necessary amount of time to make a successful and scientifically proven modification of those species. Instead, he advised using non-genetically modified seeds from plants with a one-year lifespan if the price was reasonable. On the contrary, he encouraged us to include microorganisms in our hydrogel, as he considered it to be more feasible.

Photograph of our meeting
Who did we address and why?

We contacted professor Drouzas Andreas and professor Tsiripidis Ioannis in the department of Biology at Aristotle University of Thessaloniki to seek their opinion about the implementation of the seeds.

What was the subject of discussion?

After a forest is burned, it’s really crucial for the experts to estimate what species of seeds will be used in the reforestation. Even if the best option is usually the local species, there are cases where we use different species because of the damage caused by the wildfire in the forest soil. As for our project, they advised us that the wiser choice would be to use different seeds to ensure genetic variation.

Ηow have we incorporated their feedback?

After our encounter with the professors, we had a better point of view about the selection process of the seeds that are used in the reforestation, so we were able to propose a more complete solution by regrading the seeds inside our biopolymer. Despite our proposals, the implementation of the seeds will always be advised by experts, depending on the forest soil.

Ηow have we incorporated their feedback?

After the experts' advice, we were concerned that our proof of concept for GMO seeds in the lab would not be finished in the time we had. Therefore, we made the decision that the seeds would not be engineered to have specific characteristics but rather would be incorporated into the hydrogel as needed.

Photograph of Mrs. Konstantinidou
Who did we address and why?

In order to ensure that seeds would not sprout before our material degraded, we came up with the idea to incorporate dormant seeds into it. We therefore considered including a plasmid containing the genes for the metabolic pathway of some hormones responsible for stopping this stage in our Bacillus strain. We met with Dr Helen-Isis Konstantinidou, a plant physiologist at the Aristotle University of Thessaloniki's School of Agriculture, to further develop our concept.

What was the subject of discussion?

Dr Konstantinidou found our idea innovative and interesting. She believes that the combination of seeds and microorganisms can provide very satisfying results. That’s why products that follow this principle are already starting to be designed. Regarding the part about putting dormant seeds inside the hydrogel, she expressed her disagreement. She pointed out that dormancy in some species can last from 1 to 5 years, and it is impossible for us to reverse that. The inclusion of hormones should be a very precise procedure. Different hormones are needed for different species in order to get them out of the dormancy stage. Additionally, hormones like ethylene can damage the seed if they are produced uncontrollably, resulting in a decrease in its sprouting ability.

Ηow have we incorporated their feedback?

After our meeting and some more bibliographic research, we decided not to go through with the idea regarding the inclusion of hormone production from our microorganisms. This concept seems to have a lot of drawbacks, and the possibilities of it not working are really high.

Project update

The positive feedback for the seeds encouraged us to propose them as an addition to the final product. As long as we are careful about the occasions on which we apply them, depending on the soil conditions after the wildfire, the seeds were found to be extremely beneficial when the forest cannot regenerate without any human intervention.

Wet Lab

Who did we address and why?

We decided to consult Mr. Alexiou Anargyros, a PhD candidate in Biotechnology and Synthetic Biology, because of his expertise on Bacillus subtilis.

What was the subject of discussion?

At this point, we faced problems in the laboratory regarding the enzyme of laccase. Even though we had confirmed the transformation of the strain of Bacillus subtilis, in the stage of SDS-PAGE we couldn't detect laccase. So, we asked Mr. Alexiou's opinion to guide us about our next moves. As he couldn't see a problem in our experimental design, he suggested that we use another strain of Bacillus subtilis that is protease-free. There is a possibility that the proteases of our own strain destroy the enzyme, resulting in the absence of laccase when we do SDS-PAGE.

Ηow have we incorporated their feedback?

After literature research about the strains of Bacillus subtilis, we validated that the strain we were using was not suitable for our project. Based on Mr. Alexiou’s instructions, we changed our plan, and we worked with Bacillus subtilis WB800N, a protease-free strain, as he suggested. His advice was the key to the success of our experiment, since we managed to detect the enzyme of laccase without any problem.

Photograph of our meeting with Mr Alexiou
Photograph of our meeting
Who did we address and why?

We contacted Dr Ducat Daniel, associate professor at Michigan State University and Mr. Kokarakis Manos graduate student in the Department of Microbiology and Molecular Genetics, two of the writers for the article about a Quorum Sensing System that was regulated by the production of the AHL molecule.

What was the subject of discussion?

Firstly, we presented our whole idea, and we began a discussion about it. We asked them about their opinion regarding using a quorum sensing system to make the nitrogen fixation from the cyanobacteria continuous. They didn’t agree with this option because we could easily achieve the same result by overexpressing the HetR gene, so the quorum sensing here would be unnecessary. As an alternative, they suggested that we utilize this function to apply a kill switch to our bacteria, but they didn’t specialize in this kind of technique, so we should seek someone else for further guidance. Additionally, we asked them about the different pairs of genes that they used in their study to create their quorum sensing. They were very adamant about using the LuxI LuxR genes since they were the most efficient and were not toxic compared to other genes with similar functions (LasR, Trat). Lastly, they gave us some more general advice about our experimental design. They highlighted the importance of dividing our project into small, different experiments in the lab. In this way, it will be easier for us to identify and resolve a possible problem at every step.

Ηow have we incorporated their feedback?

We were able to design our lab experiments more easily after this meeting, and we followed their advice about breaking our project down into many small steps. After also conducting our own research, we decided to overexpress the HetR gene to achieve high nitrogen fixation percentages and use the LuxI LuxR genes for our kill switch system.

Who did we address and why?

We contacted Dr Nikolaos A. Peppas, who is Professor & Director of the Institute for Biomaterials, Drug Delivery and Regenerative Medicine at the University of Texas at Austin.

What was the subject of discussion?

We presented to Dr. Peppas our hydrogels and the two co-polymers that consist of it and he approved our choices. Professor pointed out that pectin has pretty high swelling ability and we had to be careful with the ratios, because high concentration pectin might destroy our hydrogel because of hyperinflation. Regarding the extra chemical modifications of our biopolymers, he was reluctant for environmental causes. Moreover, our bibliographic research had led us to consider including cellulose nanocrystals in low concentrations. Professor informed us that they will add mechanical stability to our product but they have high pH sensitivity, it is difficult to retrieve them in the desired pure form and they will reduce the swelling ability. Additionally, concerning the application of the hydrogel with drowns, he advised us to use an extra membrane “Ac-Di-Sol” to restrain the capsule and that it will dissolve after it reaches the ground. Finally, he encouraged us to use the Time Temperature Superposition Method to predict the characteristics of our polymer in 30 days in a smaller time period and to contact swelling and degradation tests in different pHs, because the pH condition Is the most important in swelling ability.

Ηow have we incorporated their feedback?

After the meeting, we decided that we would not make extra chemical modification to our polysaccharides and that we would use ratios from 1:3 to 1:2 in our experiments (pectin:chitosan) in different pHs. Additionally we overruled the use of cellulose nanocrystals. Finally, even if it was ideal to use the Time Temperature Superposition Method, we decided not to include this method because of time and equipment limitations.

Photograph of our meeting with Dr Peppas
Who did we address and why?

We approached Mr. Stamatis Damalas when we were in the design stage of our project to get his opinion about the wet lab experiments we were planning to do.

What was the subject of discussion?

We first started explaining to him the concept of our idea and afterwards, we delved into the scientific part of the project to see his point of view on our experimental design. In particular, we discussed the proof of concept we must have for our project as well as the control experiments. Part of the conversation was also about the characterization of our parts and the best way to check our results considering we are working in the field of synthetic biology.

Ηow have we incorporated their feedback?

After his valuable opinion, we were able to configure our design in the best way we could. Mr. Damalas advised us to be careful when we characterize our parts and after the meeting within him, we decided to incorporate fluorescent proteins to detect the products of our genes of interest to ensure we had the desired results and avoid any extra trouble in the lab.

Who did we address and why?

We arranged a meeting with Mrs. Katerina Margariti, a MSc student in Biotechnology at Aalborg University.

What was the subject of discussion?

After she comprehended the function of the system we have designed in the bacteria, we proceeded to analyze the experimental design. She reviewed the experiments to make sure everything in our project was complete, and she suggested new ways to detect our molecules that we weren’t aware of before. It’s worth mentioning that she asked us useful questions about the conditions of the microspheres and the environment of the microbes to assure that we had thought correctly about our control experiments and the conditions we had to examine.

Ηow have we incorporated their feedback?

The useful feedback from Miss. Margariti made us check our experimental design even more thoroughly, which resulted in the addition of extra experiments. Therefore, we need more control experiments in order to have a more scientifically approved proof of concept. Regarding the enzyme laccase, she suggested checking his activity with an activity test kit and found it quite interesting to try in the lab. Lastly, queries about the microspheres, like their dimension, made us look more into the bibliography to secure the ideal conditions for the microorganisms and the factuality of their products.

Photograph of Mrs. Margariti

Project update

The guidance of the above, was valuable to organize our experiments and make changes when they were necessary like the one about the strain of Bacillus subtilis. When the results in the lab differed from the one we had predicted, the advice from people with experience, was auxiliary to detect what could have gone wrong.

Dry Lab

Who did we address and why?

Dr Malousi Antigoni, professor at Medicine department of Aristotle University of Thessaloniki.

What was the subject of discussion?

Dr Malousi underlined that there is a wide range of transcription rates for any gene. When this gene is in a plasmid this difference may be due to the existence of neighboring genes. Otherwise, when these differences are reported between the same gene but in different organisms or strains there might be a mutation in the preserved or the μεταβαλλομενη area of the gene that causes this number disturbance. Lastly, she commented that in her opinion a suitable programming language for our system would be the R programming language.

Ηow have we incorporated their feedback?

After our discussion we decided to check the direct effect of the variation in association constant of IPTG inducible promoters and the indirect effect performing sensitivity analysis to examine the effect in IPTG declaration with varying concentrations.

Photograph of Prof. Malousi

Implementation

Photograph of our meeting with the Thessaloniki Forestry Department
Who did we address and why?

For that purpose, we contacted the reforestation department of the Thessaloniki Forestry Department.

What was the subject of discussion?

Questions like "When’s the best time to use our product after a forest fire?", "In what cases can our project be useful for the recovery of the soil?" and “What are the current techniques to prevent soil erosion after a fire?" are required to be addressed for the fulfillment of our idea. They initially enlightened us about the procedure before the reforestation, which includes the application of tree trunks to prevent the water run-off after the first rainfalls, and we also must say that we were surprised to learn that the ash isn’t removed from the soil since it's a source of organic matter for the plants.

Ηow have we incorporated their feedback?

They estimate that our product can be used along with the tree trunks they place to ensure water absorption from the soil and mechanical stability, as well as in cases of forests with extreme ascents that humans can’t reach. Following these techniques, the reforestation process starts approximately 2 years after the forest fires. Regarding the seeds, they found their addition inside the hydrogel matrix really meaningful, mostly in forests that have burned twice in a period of fifteen years since, after a second fire, the recovery of the forest is challenging due to the loss of seeds that have survived the previous fire.

Who did we address and why?

We contacted Dr Christos Tsantilas, agroscientist and soil scientist, because of his research experience in soil conditions in Greece.

What was the subject of discussion?

At first we discussed the different conditions and the multi-complexity of the soil, and how our product could be compatible with it. More specifically, Dr Tsantilas informed us that the soil in forestry areas is negatively ionized, so we want our product to be positively charged. We discussed the three different compartments that every soil type consists from and how we compare them. Continuously, we discussed the conditions of the soil after a wildfire. Dr Tsantilas reassured us that the two most major problems are the deduction of the available organic matter and the inability to absorb water. He recommended designing our product to work in pH conditions 5-8, in order to be compatible, with optimal conditions being 6,5-7 pH. Moreover, we asked Dr Tsantilas about the soil erosion and when he considered important and useful our biopolymer to be applied. According to his scientific experience, most vulnerable areas are the ones that have high slopes and that “Euphoresis” is better if it is applied to prevent soil erosion and not when the desertification has been established. Finally, regarding the application of our product, Dr Tsantilas suggested it be applied in a period of mild rains, so that the rainwater can be easily absorbed.

Ηow have we incorporated their feedback?

After this meeting we decided to test our product on the pH range 5-8, with optimal 6,5-7. Also, we decided to suggest the implementation of our product in periods of mild rains to prevent soil erosion.

Photograph of our meeting with Dr Tsantilas
Photograph of our meeting with Dr. Mavromatis
Who did we address and why?

We got in touch with Dr Mavromatis Athanasios, an Agricultural Science professor at Aristotle University of Thessaloniki who is part of the ‘’Genetics and Plant Breeding Lab’’.

What was the subject of discussion?

The conservation with him was also a confirmation to not interfere at all with the seed’s genetic material. He believes that it is crucial for genetically modified plants to not be released in natural habitats because the risk to overpower the endemic species is really high. He suggested that our hydrogel could act as a seed priming and he proposed three different implementations for our project. Firstly, application after a fire, our primary idea, secondly application in decertified lands in order to regenerate them and lastly application to create artificial forests in distant environments like the deserts or even the space. He commented that if our material were applied to the latter ecosystems we could incorporate genetically modified seeds, in order for the plants to withstand all those extreme conditions. In these environments the risks mentioned above are low since they are so remote.

Ηow have we incorporated their feedback?

Dr. Mavromatis’s point of view of our project helped us envision the future potentials of our product. Our literature research extended and we looked into all the proposals he suggested. The hydrogel, its ability to absorb water with the combination of its biological nature, that makes it an ecological product, has many applications on environments that are in the need of restoration or on soils that are infertile.

Who did we address and why?

The Varicon Aqua manufactory is about a company that makes algal photobioreactors, so we wanted to listen to their point of view about the cyanobacteria cells that are incorporated in our project.

What was the subject of discussion?

Based on their data, we had a reference that the procedure of algal production costs approximately 50 euros per liter. According to their information, the production of cyanobacteria will have the same expenses. Even though the price, they were positive about the implementation of our biological product, since the restoration of burned lands and the environmental conservation is more valuable.

Ηow have we incorporated their feedback?

Joe McDonald’s guidance was valuable to estimate the cost of our product regarding the cyanobacteria. Even though the little differences in the price, the calculation of the cost was very helpful to define if our product is feasible from the aspect of profits for a company.

Photograph of our meeting with Varicon Aqua
Who did we address and why?

Dr Vryzas Zisis is a professor at the department of Rural Development of Democritus University of Thrace.

What was the subject of discussion?

He informed us that products with microbiomes that target the enrichment of the soil are getting really popular. So, he believes that our idea would not only be successful scientifically but commercially too. In our conversation we mainly focused on where this kind of product should be implemented. His proposal was to not only be applied to decertified areas but also to be applied in: a) buffer zones near rivers, where high water runoff is observed, b) sloping areas that have been burnt and is very difficult to help the forest regeneration in any other way c)areas that are prone to fires(every 3-4 years), d) areas that accommodate endangered bird species, so that we can retain their home and e) urban areas to increase the vegetation near houses and in parks. Lastly, he commented that our main goal should be to boost areas in order to increase their biodiversity. Regarding who is going to be the end user of our product, he believed that forestry departments, the regions of our country or decentralized administrations would be the ideal target groups.

Ηow have we incorporated their feedback?

Through this insightful talk our team was able to clearly construct the way our product is going to be applied in the future but also the alternate areas, except burnt forests, that could benefit from it.

Who did we address and why?

Dr Dimitrios Psaltopoulos is a professor at the department of Economics at the Aristotle University of Thessaloniki.

What was the subject of discussion?

Dr Psaltopoulos really believed that our idea is a great example of circular economy. Unfortunately, in Greece there are no motives, so that more companies are pushed to adopt a circular economy business plan. He pointed out that for us to propose a completed idea it is really important to include into our presentation the cost, the feasibility and the market demand of our product. More specifically for the cost, he stated that even though he believes that it will probably be a costly project, the cost would counterbalance with the positive impact our project has. One concern he had about our idea was whether the amount of food waste would be enough to cover the demand of our material production. Since the wildfires frequency is continuously increasing the demand of our product would increase too. So, in his opinion he believes that we should find a way to connect people that have waste to provide, with people, like us, that want to utilize it.

Ηow have we incorporated their feedback?

His questions about how we would connect with possible waste suppliers caused us to think about a possible solution to this problem. We thought, designed and created an app where industries with food waste would register their waste and people interested in buying and utilizing it would connect with them in order to acquire it. This helped us cover the existing gap between demand and availability of waste.

Photograph of our meeting with Professor Kairis
Who did we address and why?

We wanted to specify even more what types of areas will need the Euphoresis but also when the right time for its implementation is going to be. That is why we scheduled a meeting with Dr Kairis Orestis, a professor at Agricultural University of Athens.

What was the subject of discussion?

Firstly, he expressed his admiration for our innovative idea and stated that he hasn’t read about anything like Euphoresis being applied in forests or soil, but he has heard of the combination of hydrogel and microorganisms in geotechnical jobs. He explained that it is necessary to observe the different changes happening due to the fire on the soil. These changes depend on a) The characteristics of the fire: the duration the velocity and the temperature created by the fire are factors that affect the soils conditions in different ways, b) the type of soil; For example, if at 10 cm depth there is rocks the organic matter of this soil is very little, increasing in this way the danger of erosion. After taking into consideration the above parameters will our product be ready to be applied. He also informed us that after a fire, if the soil stays undisturbed, the first vegetation will appear in 6 months. If our product has the prospect of bringing this type of plant earlier, he believes that it should be applied very soon after the fire.

Ηow have we incorporated their feedback?

The discussion with Dr. Kairis was a great opportunity for us to take into consideration the different parameters that affect the soil after a fire. In this way we ended up creating and proposing Euphoresis for specific types of burnt forests that lack organic matter, that have burnt twice in a small span of years, that have experienced fires with high duration or fires that burnt the forest superficially.

Closing the Loop

During the year, we faced a lot of challenges when designing our idea. There were countless occasions where we thought that our project was complete, but the scientists we approached always reminded us that things are not so simple in science. After many encounters with experts in different fields, we finally managed to conclude the final design of Euphoresis. So, we got in touch again with some of the professors that contributed to shaping our idea to get their feedback and opinion.

Closing the Loop

Who did we address and why?

Dr. Mourtzinos Ioannis is a professor at the school of Agriculture at the Aristotle University of Thessaloniki.

What was the subject of discussion?

Among the different techniques that are used, he suggested looking into the ultrasound-assisted extraction of polysaccharides. An efficient and modern method regarding energy consumption and time. Specifically, an advantage refers to the limited use of heat for a large amount of time in comparison with the other methods.

Ηow have we incorporated their feedback?

In order to set up a complete plan for the application of "Euphoresis,", we conducted research on the proposed technique that is based on ultrasounds. Even though there are ecological benefits, the problem of cost arises for scale-up production, whereas organic acid-based extraction is a more inexpensive way. So, like most methods, it depends on the strategy of the industry that undertakes the extraction in terms of ecological and economic gains.

Photograph of our meeting with Professor Mourtzinos
Photograph of our meeting
Who did we address and why?

Dr Giorgos Zalidis, professor at department of Agriculture of Aristotle University of Thessaloniki was one of the primary people who helped us develop the first steps of our idea, So it was necessary for us to meet with him and discuss the development of our project.

What was the subject of discussion?

Dr Zalidis's first comment was that we have developed an innovative idea that targets the soil's health. He underlined that we should not only focus on the implementation of our products in burnt forests but also on other kinds of degraded soil. We should propose this solution to soils with high-risk erosion, whether that comes from anthropogenic activities or from natural disasters such as the destructive floods our country had to face this year. Regarding the consistency of our hydrogel, he commented that he believes that the polysaccharide purification is generally a costly procedure. This is not a problem because our product has as the main buyer the government or the regions of the country. Despite that, he told us that if we found a way to reduce its cost, it would be a very attractive solution for farmers to retain their soil health. He also pinpointed the importance of our project in reducing atmospheric CO2. More specifically, he explained that our material promotes the regeneration of plants and includes microorganisms. In this way, with the process of photosynthesis and the increase in the soil microbiome, we can achieve carbon storage. Regarding the scale up of our project, he stated that we should, after the in vitro steps, follow in vivo steps on a controlled part of land, and he informed us that there is a chance more polysaccharides are going to be needed for our final product. Lastly, he told us that it is very important that we highlight the influence of our project on human health. Soil health has an immediate impact on human health since the products deriving from the soil can influence it drastically.

Ηow have we incorporated their feedback?

After this insightful conversation, we made sure we created a wider implementation plan for our project and stressed even more the important role it plays not only in the health of the environment but in human health too.

Who did we address and why?

Dr Giorgos Dimitrakopoulos, head of the department of Forestry at Aristotle University of Thessaloniki helped us to deeply understand the problems a fire is creating and provided us with information so that we could form our project. So, we wanted to meet again with him and present how we had incorporated his feedback.

What was the subject of discussion?

He was really happy about the course of our idea. He stated that we had targeted the most important soil problems successfully. We asked him about an idea we had regarding the addition of a plasmid into the B. subtilis strain in order for it to produce plant hormones helping the faster seed germination. He wasn’t positive about this concept and told us that this would be unnecessary since when the seeds come in touch with adequate amounts of water, they will quickly sprout. Since our hydrogel will provide this to the seeds no further modification would be needed. Lastly, we discussed the safety of our product regarding wild animals. He believed that it would be highly unlikely for an animal to eat a material like that. Additionally, most animals would not be present in the period we potentially will apply our product making it even more not possible to be consumed by wildlife.

Ηow have we incorporated their feedback?

After our meeting we were even more hopeful about the application of our product. The confirmation from Dr Dimitrakopoulos , an expert in the matter of wildfires was what we needed to continue with the development of our idea.

Photograph of our meeting
Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Who did we address and why?

Alexios Polydoros, professor at school of Agriculture at Aristotle University of Thessaloniki.

What was the subject of discussion?

We presented the point our project had reached and we talked about a certain part we had doubts about. Our concern was about the way we would stop the long period of dormancy some types of seeds have. He was negative about genetically modifying the Bacillus subtilis to produce hormones for this job. He proposed that we process the seeds mechanically (with sandpaper) or chemically (copper sulfate) and then incorporate the seeds. Lastly, regarding the application of our product he commented that we conduct an analysis of the microbiome of the affected soil. In this way, we could change the compound our microorganisms produce to suit the needs of the soil.

Ηow have we incorporated their feedback?

We decided not to look further into the idea of hormones. Also, his proposal helped us create a clear implementation plan regarding how we would manage the faster seed sprouting and creating a product suitable for every case of affected soil.

Sustainable Development

Who did we address and why?

Mr Matzarakis with his specialty helped us connect even more to understand the important role our project has in promoting the sustainable development goal regarding life on land.

What was the subject of discussion?

In our conversation Mr Matzarakis underlined the severity of the phenomenon of climate change. He stated that in some places the rains that occur are increasing while in others the drought periods are elongated. In his opinion our innovative copolymer can help in both scenarios: on the first one by retaining large amounts of water, decreasing in this way the danger of erosion and on the second scenario its water-retaining and slow-releasing ability can help retain the soil's moisture in satisfying levels. What is more, we learned that due to climate change the soil’s quality is drastically reduced because of the continuous changes in soil’s temperature and the rain’s frequency. So, the enrichment of the soil with nutrients plays an important role in retaining the fertility and the stability of the soil. Additionally, a disturbance of the ecosystems is observed. The biodiversity of the ecosystems is gradually lost. Mr Matzarakis believes that our idea about incorporating seeds from local trees into the hydrogel is a great way of dealing with these problems and helping the ecosystems adapt to the change in their climate factors. Lastly, he highlighted that our project is indirectly helping the CO2 binding since it helps with the regeneration of the biggest carbon pools: forests.

Ηow have we incorporated their feedback?

Our meeting with Mr Matzarakis helped us set our project’s values. He supported with his statements the importance and the necessity of our project. In a world which is constantly changing the means for stopping this continuous change is crucial. Our project provides this solution. With this information it was clear for us how much our project connects and helps in the accomplishment of the 15th sustainable development goal.

Photograph of our meeting with Mr Mantzarakis
Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Who did we address and why?

We wanted to meet with Dr Aristotelis Papageorgiou, a professor at the department of Molecular Biology and Genetics at Democritus University of Thrace, so that we could better understand the positive and the possibly negative impact our project has on an environmental, financial, and social level.

What was the subject of discussion?

We asked him about his opinion regarding the issue of desertification in Greece. He informed us that the danger of this phenomenon is rising more and more. Climate change, overgrazing and irrigation are factors contributing to this increase. He added that fires are starting to appear in forests in higher altitudes, that mainly consist of pine trees which are not able to regenerate. So, our product is a necessity for the years to come. Regarding the long-term impact our product is going to have, Mr Papagergiou stressed that our project could help in creating more available jobs. By helping in the forest regeneration jobs like resin workers and beekeepers become more popular. As a negative impact he stated that if there is not a right distribution of government funds, there might not be enough for any other solutions to be implemented. It is important for our product to be applied with other existing solutions and not to eliminate them.

Ηow have we incorporated their feedback?

Dr Papageorgiou clearly explained all the possible positive and negative impact our project could have. With his feedback we concluded the linkage between our project and the 13th sustainable development goal since in his opinion its application is going to be necessary due to the drastic climate change we experience.

Who did we address and why?

We met with Dr Despoina Xanthopoulou, a psychologist, so that we could connect the impact our project has on the human’s mental health.

What was the subject of discussion?

Dr Xanthopouulou was glad we reached out to her. The link between human health and more specifically mental health and environment undisputed. She told us that one of the first things they are taught in psychology is about this strong connection. The natural scenery is a multisensory environment. It unconsciously arouses senses like smell and vision. This arousal can help people feel more content but also more attentive in their everyday tasks like their jobs.

Ηow have we incorporated their feedback?

With Dr Xanthopoulou's information we were better able to understand the impact our project has on human mental health and link our project with the 3rd Sustainable Development Goals. After this meeting we got more determined to share this important information with the public. That’s why we decided to create informative leaflets regarding this matter and distribute them across the university campus. You can read more about this initiative on the sustainability page.

Photograph of our meeting with Mrs Xanthopoulou
Photograph of our meeting with Mrs.Aristoteli Papageorgiou
Who did we address and why?

Dr Grigoris Zarotiadis, a professor at the department of Political Science of Aristotle University of Thessaloniki that specializes in circular economy, helped us to better realize and emphasize the important role our project has in the promotion of this sustainable development goal.

What was the subject of discussion?

Firstly, we discussed the food company’s waste. He mentioned that the food companies from which we would like to extract our products have high amounts of waste that is generally not utilized. So, he believes that enough fruit and crustacean waste exists in order for us to create and implement our idea. He added that if we buy the waste or we provide our services of collecting and using another company’s waste at a low price we would certainly have a lot of suppliers. He generally believed that our project is a great application of the values of the circular economy. Despite that fact he stated that unfortunately a lot of businesses that are based on the sustainable development goals do not thrive financially since most of the time the end buyer is not a residential customer but any stakeholder.

Ηow have we incorporated their feedback?

After our conversation we could easily perceive how much our product follows the principles of circular economy(12th Sustainable Development Goals) and we had gained the reassurance that it would really contribute to the decrease of the food waste.

Who did we address and why?

We met with Stavros Koutantonis, a high school teacher highly involved with the sustainable development goals.

What was the subject of discussion?

Mr Koutantonis has held many actions in order to include the sustainable development goals in the life of young kids. He believes that the sdgs should be introduced to the kids at the very early stages of their lives. He helped us understand that we need to develop different activities for kids depending on their age. He stated that younger kids would benefit more from interactive games, while older ones would be more interested in activities including discussion.

Ηow have we incorporated their feedback?

His guidance helped us create multiple activities focusing on a wide range of ages. (You can see more on the Sustainable Development Goals page.) In this way, we were able to promote the sustainable development goals, and more specifically, the 4th goal.

Photograph of our meeting with Mr Koutantonis
Photograph of our meeting
Who did we address and why?

We contacted environmentalist and forester Victoria Datsi because of her strong presence on Sustainable Development Goals through her work on Non-Profitable Organizations like We4all.

What was the subject of discussion?

We discussed the consequences of wildfires and the action that we could take from the sustainability prospect, to help. She considers our project very interesting and innovative and she could not suggest a way that it would go against the SDGs. As for the extra actions that we could take she was really reluctant against the participation in reforestation open calls, as it is not always clear if they are beneficial or not. On the other hand, she suggested participating in cleaning/trash gathering open calls or even organizing one, as it contributes substantially to the SDG 15.

Ηow have we incorporated their feedback?

We decided to initiate a cleaning action and try to cooperate with other student teams from our university or other teams in general. This idea evolved to the participation in WWF program “Adopt a Beach”.