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Parts | WHU-China - iGEM 2023
| WHU-China - iGEM 2023
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Our team is nominated for Best New Composite Part. See Awards.

In (BBa_K4630001-BBa_K4630120), we designed a series of basic and composite parts to fulfill the recording event, using the concept of self-targeting editing and self-recombination.

  • To construct composite parts, we added three stgRNA sequences generated by our drylab as basic parts (BBa_K4630001-BBa_K4630003), and some components we need (BBa_K4630004, BBa_K4630005). Then, two sets of designs were created: one with each cassette assigned a unique barcode to ensure accurate recombination (BBa_K4630100-BBa_K4630103), and another without the need for barcode accumulation (BBa_K4630110-BBa_K4630115), resulting in a more compacted and extendable device. Moreover, we employed EGFP as the reporter of successful recording and developed a series of parts (BBa_K4630116-BBa_K4630120).

(BBa_K4630200-BBa_K4630202) involve the three plasmids we used to express Cas9 and Lambda-Red. They are in line with the progress of optimization.
(BBa_K4630300-BBa_K4630301) are the two optimized new parts of the EL222 system developed by directed evolution.
(BBa_K4630400- BBa_K4630403) are the parts we designed to perform sgRNA screening. As these parts are directly synthesized or Gibson cloned, they are assembly incompatible up to now.

New Parts

  • Description
  • self-targeting guide RNA 1
  • self-targeting guide RNA 2
  • self-targeting guide RNA 3
  • double terminator
  • Lac promoter + operator
  • Cas9
  • stgRNA-barcode-cassette 1
  • stgRNA-barcode-cassette 2
  • stgRNA-barcode-cassette (1+2)
  • stgRNA-barcode-cassette (0+2)
  • stgRNA-cassette 1
  • stgRNA-cassette 2
  • stgRNA-cassette 3
  • stgRNA-cassette (1+2)
  • stgRNA-cassette (1+2+3)
  • pCDF-Duet1-T7-stgRNA-cassette (1+2+3)
  • XbaI-stgRNA-1-SpeI-BamHI-selfRecombination
  • XbaI-stgframe-SpeI-BamHI-selfRecombination
  • pET28a-eGFP-stgRNA1
  • pET28a-eGFP-stgframe
  • pET28a-eGFP-stgRNA1-stgframe
  • pCas
  • pCasop
  • pCasop-stgRNA(1+2+3)
  • EL Binding Site(pEL)
  • Blue light activated inducible system with RFP reporter
  • LacZ inserted with 50*( N20+PAM)
  • EGFP inserted with 50*( N20+PAM)
  • N20 screening-LacZ
  • N20 screening-EGFP
  • Type
  • Basic
  • Basic
  • Basic
  • Composite
  • Composite
  • Basic
  • Composite
  • Composite
  • Composite
  • Composite
  • Composite
  • Composite
  • Composite
  • Composite
  • Composite
  • Plasmid
  • Composite
  • Composite
  • Plasmid
  • Plasmid
  • Plasmid
  • Plasmid
  • Plasmid
  • Plasmid
  • Basic
  • Composite
  • Measurement
  • Measurement
  • Composite
  • Composite
  • Main function
  • Basic bricks
  • Basic bricks
  • Basic bricks
  • Basic bricks
  • Basic bricks
  • Basic bricks
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • pCasop
  • pCasop
  • pCasop
  • EL222
  • EL222
  • N20 screening
  • N20 screening
  • N20 screening
  • N20 screening

Used Parts

  • Description
  • EGFP
  • Lambda-Red
  • Cas9
  • Standardized Cas9 coding sequence + B0015 terminator
  • araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
  • pBAD promoter
  • Lac operator/pSB1C3
  • E. coli lac promoter
  • LacI - Coding for lac repressor
  • Blue light activated inducible system with RFP reporter
  • pEl222
  • EL222 protein
  • El222 binding(C120)
  • RFP Coding Device
  • SBFP2: strongly enhanced blue fluorescent protein
  • The thiosulfate sensing system under the control of J23103
  • lasR activator
  • Pluxr
  • Biosensor device for erythromycin detection
  • pPcau
  • Type
  • Coding
  • Coding
  • Coding
  • Composite
  • Promoter
  • Promoer
  • Operator
  • Promoter
  • Coding
  • Composite
  • Promoter
  • Coding
  • Regulatory
  • Reporter
  • Coding
  • Composite
  • Coding
  • Promoter
  • Composite
  • Promoter
  • Main function
  • All
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • Recording
  • EL222
  • EL222
  • EL222
  • EL222
  • EL222
  • EL222
  • IBD Diagnosis
  • PA Infection Diagnosis
  • PA Infection Diagnosis
  • Macrolides Detection
  • PCA Monitoring