Supplementary Data

Additional data, including primer sequences and sequencing data, is available here.

Primer Sequences

These are the tables used during the assembly of the plasmid constructs.

Primer NameSequence
pET_fwdTAATACGACTCACTATAGGG
pET_revGCTAGTTATTGCTCAGCGGT
sfGFP_fwdggctacggtctcaaatgCGTAAAGGCGAAGAGCTGTTCACTG
sfGFP_revggctacggtctccaagctcaTTTGTACAGTTCATCCATACCATGCGTGA
pET28-noLacI-BsaI_revggctacggtctcacattAGAGGGGAATTGTTATCCGC
pET28-BsaI_fwdggctacggtctcacattAGAGGGGAATTGTTATCCGC
pET28-BsaI_revggctacggtctcacattAGAGGGGAATTGTTATCCGC
pET28+LacI+BsaI-T7_revggctacggtctcacattAGAGGGGAATTGTTATCCGC
Anderson+vsfGFP+BsaI_revggctacggtctcaaagcTATAAACGCAGAAAGGCC
pET28 Anderson Colony PCR_fwdCATACCCACGCCGAAACA
Part 1 (Promoter & BmoR) FWDTGTCTCGGTCTCCaatgTTGACGGCTAGCTCAGTC
Part 1 (Promoter & BmoR) REVTGTCTCGGTCTCCAGTACCGATGCGAGACTG
Part 2 (terminator + UAS +pBMO + RBS) FWDTGTCTCGGTCTCGTACTTAAGCTTAACCAGGCATCAAAT
Part 2 (terminator + UAS +pBMO + RBS) REVTGTCTCGGTCTCGTGAGTATTTCTCCTCTTTCTCTAG
Part 3 (vsfGFP terminator) FWDTGTCTCGGTCTCGCTCATATGTCTAAGGGTGAAGAATTGT
Part 3 (vsfGFP terminator) REVTGTCTCGGTCTCGaagcTATAAACGCAGAAAGGCCC
pJUMP28-1A Fwdggctacggtctctgctttgactgagttgcacgctg
pJUMP28-1A Revggctacggtctctcattgtatatctccttcttaaagttaaaca
pET28a-BsaI FwdggctacggtctcagcttTGAGATCCGGCTGCTAAC
pET28a-BsaI RevggctacggtctcacattGTATATCTCCTTCTTAAAGTTAAACAAAATT
Part 1 primer attempt 2 FwdTTGACGGCTAGCTCAGT
Part 1 primer attempt 2 RevTTAAGTACCGATGCGAGAC
pBMO FwdGGTCTCccacagatagtaggtgctgcggc
vsfGFP FwdGGCTACGGTCTCAAATGTCTAAGGGTGAAGAATTGTTCACAGGAGTTG
vsfGFP-0 FwdGGCTACGGTCTCAAATGATGTCTAAGGGTGAAGAATTGTTCACAGGAG
vsfGFP-0 RevGGCTACGGTCTCCAAGCTCAAGAAACAGTGACTTGCGTTCCTTGG
PS1 (Differentiate construct and sfGFP)GGCTACGGTCTCCAAGCTCAAGAAACAGTGACTTGCGTTCCTTGG
PS2 (Differentiate construct and sfGFP)GCGGCAACCGAGCGTTC
pET28 BsaI Rev (right overhang for TIIS)ggctacggtctcgctccATTTCGCGGGATCGAGATC
pET28 BsaI Fwd (right overhang for TIIS)ggctacggtctcccgctTGAGATCCGGCTGCTAAC
J23100+vsfGFP Fwd (right overhang TIIS)ggctacggtctcaggagTTGACGGCTAGCTCAGTC
J23100+vsfGFP Rev (right overhang TIIS)ggctacggtctctagcgTATAAACGCAGAAAGGCC
J23100+vsfGFP+BsaI FwdggctacggtctctaatgTTGACGGCTAGCTCAGTC
J23104+vsfGFP+BsaI FwdggctacggtctcgaatgTTTACGGCTAGCTCAGTC
J23106+vsfGFP+BsaI FwdggctacggtctctaatgTTTACGGCTAGCTCAGTC
J23110+vsfGFP+BsaI FwdggctacggtctcaaatgTTTACGGCTAGCTCAGTC
J23114+vsfGFP+BsaI FwdggctacggtctccaatgTTTATGGCTAGCTCAGTC
J23119+vsfGFP+BsaI FwdggctacggtctcgaatgTTGACAGCTAGCTCAGTC
pET28a+Lacl+BsaI-T7 RevggctacggtctcacattATTTCGCGGGATCGAGAT
77 gp104 FwdTCCTTCGGTCTCCAATGatggtaacgaaagaatttttaaaaac
77 gp104 RevTCCTTCGGTCTCCAAGCttaatattcaacaatcgctggg
BmoR without RS for stuff we don’t like FwdTGACGTGGTCTCGAATGATGTCCAAAATGCAGGAGT
BmoR without RS for stuff we don’t like RevTGACGTGGTCTCGAAGCTTAAGTACCGATGCGAGAC
Full pBMO + UAS FwdCCGAAAGGTCTCGggagccacagatagtaggtgctg
Full pBMO + UAS RevCCGAAAGGTCTCGAGTActctaacgctttcagcaag
G1 gp240 FWDCGAGATGGTCTCGAATGatggtaatcccaagtatcaagg
G1 gp240 REVCGAGATGGTCTCGAAGCttactcaccataacgctcc
G1 gp240_FwdggctacggtctcgaatgATGGTAATCCCAAGTATCAAG
G1 gp240_RevggctacggtctcgaagcTTACTCACCATAACGCTC
Optimised vsGFP (for the biosensors) FwdCCGAAAGGTCTCCAATGCATatgTCTAAGGGTGAAGAAC
Optimised vsGFP (for the biosensors) RevCCGAAAGGTCTCCAAGCCTCGAGtcaGCTAACAGT
pET28a-noLacI-BsaI RevggctacggtctcacattGCGCAACGCAATTAATGTAAG
T4 Alc FwdggctacggtctcaaatgATGGATCTGCAGCTTATC
T4 Alc RevggctacggtctcgaagcTTACATGCAGAGAGTTTTG
T4 AsiA FwdggctacggtctcaaatgATGAATAAAAACATCGACACAG
T4 AsiA RevggctacggtctctaagcTTATTTGTTCGTATACATCTCTAG
T7 gp0.7 FwdggctacggtctcgaatgATGAAAGAGATTGACCGTG
T7 gp0.7 RevggctacggtctccaagcTTAGCCCATTAACATTGC
T7 gp2 FwdggctacggtctctaatgATGTCAAACGTAAACACG
T7 gp2 RevggctacggtctcgaagcTTACTTTGGTGCTACACAAG
T7 gp79 FwdggctacggtctcaaatgATGGATATGTTTTCACTCG
T7 gp79 RevggctacggtctctaagcTTACAGATAGGTAACGCC
T7 gp104 FwdggctacggtctcaaatgATGGTAACGAAAGAATTTTTAAAAAC
T7 gp104 RevggctacggtctccaagcTTAATATTCAACAATCGCTGG

Sequencing Data

This sequencing data is from alignments.


Anderson Promoters


GFPs


Growth Slowing Genes


Non-Final Sequencing Data