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CONTENTS
Background Introduction of the First-Generation System Reaction Vessel: Time Control Chip: Reagent Kit: Usage Instructions: Consumer Feedback: Second Generation Hardware: Display video User Manual Significance: Cost structure: Safety Considerations in Environmental Testing: If you have any questions, please contact us

Background

After completing our laboratory work, we engaged in discussions with some workers, hoping that they would use our solution for detection. Workers informed us that our current workflow is overly complex and challenging to operate, particularly for those without a background in biology. Furthermore, the majority of factories lack standardized laboratories capable of conducting such procedures.

Introduction of the First-Generation System

We aimed to design a hardware device for detecting the concentration of p-cresol in factories. We consulted with the workers to understand their expectations for this hardware device. Workers expressed a desire for simplicity, affordability, and visual feedback.

Based on these requirements, we developed this device, primarily composed of:

  1. Reaction vessel (reactor bottle)
  2. Time control chip
  3. Air pump
  4. Power adapter
  5. Accompanied by various reagents.

The design of this device was shaped by the need for ease of use, cost-effectiveness, and providing visual feedback to users.

Reaction Vessel:

The reaction vessel is designed with two ports, one long and one short. The long black port is connected to the air tube, while the short red port is exposed to the atmosphere. Below the short port, there is a small tube that aids in the dissolution of air into the reaction liquid.

Time Control Chip:

The time control chip regulates the duration of the reaction process in the device. It ensures precise timing for the various steps involved in the detection process.

This code, written in Python, simulates a time controller with four buttons: time plus, time minus, time reset, and switch. The default time is 20 minutes:

Reagent Kit:
  1. LB Agar Medium - Used for bacterial strain activation.
  2. MBTH (s) + Engineered Bacterial Freeze-Dried Powder (s) - Stored in brown bottles due to the light sensitivity of MBTH.
  3. Lysis Solution - A solution of 100 mM Arabitol (pre-mixed 100-fold dilution).
  4. Soapy Water - Used for measuring the air pump flow rate.
Usage Instructions:
  1. Start by using a flow meter to measure the air pump's flow rate.
  2. Calculate the running time based on a total air absorption of 10 liters, and input this time into the time control chip using the buttons.
  3. Add LB agar medium to the mixture of engineered bacterial freeze-dried powder and MBTH.
  4. Extract 5ml of bacterial solution into the reaction vessel, connect the air tube, and start the device.
  5. After the process is complete, add Arabitol to the reaction vessel to lyse the bacteria and release tyrosinase.
  6. Wait for half an hour, then determine the p-cresol concentration in the air by observing the color change in the reaction vessel.
Consumer Feedback:

When we initially introduced this device to workers for the first time, we encountered the following issues and received some suggestions:

  1. Some users connected the air tube to the wrong port on the reaction vessel, causing backflow of the reaction liquid and damaging the air pump due to water ingress.
  2. During the operation, liquid splashed onto the time control chip, leading to chip damage.
  3. Accidental pulling or detachment of wire connections occurred during use, resulting in device damage.
  4. In some areas of the factory, suitable power outlets were difficult to find, so portability would be beneficial.

Based on consumer feedback, we can consider improving the hardware design to address these issues and improve the reliability and suitability of the device.

Second Generation Hardware:

Based on feedback from the first version of the hardware, we have made improvements to address the issues identified.

To address the first issue, we have added a buffer bottle to prevent accidental damage to the device due to misconnections. For a detailed explanation of how this works, please refer to the video demonstration:

This improvement significantly enhances the device's durability and user-friendliness while reducing the risk of damage due to misoperation.

To address the second and third points, we have added a plastic casing to the device. Below is a description of the casing design:

The casing primarily features four testing ports, an empty buffer bottle compartment, a slot for storing a 5ml syringe, and a time control area.

This casing serves to protect the device's internal components, reducing the risk of damage from liquid splashes or accidental detachment of wires during operation. It enhances the device's robustness and durability.

To address the fourth point, we have redesigned the device to support portable power sources. It primarily includes:

  1. Buffer bottle to prevent accidental device damage.
  2. Four sets of reaction vessels.
  3. A 5mL syringe.
  4. Time controller.
  5. Portable power source.
  6. Power adapter (110V-220V).

This modification allows for greater mobility and versatility in the device's usage, especially in locations where suitable power outlets may be limited.

Display video

This is a video demonstration of the hardware presentation process. The results indicate that our hardware device can effectively detect p-cresol in the air.

The successful demonstration of our hardware device's capability to detect p-cresol in the air is a significant achievement, and it underscores its practicality and value in real-world applications.

User Manual Significance:

This user manual serves as a vital resource to ensure the effective and safe utilization of our p-cresol detection device. It empowers users with comprehensive guidance on device operation, maintenance, and safety, ensuring accurate results while adhering to iGEM's rigorous hardware standards. The manual is a testament to our commitment to user success, providing clarity and support throughout the p-cresol detection process.

Cost structure:

Please note that these cost estimates are provided in a more cost-effective range. Actual costs may vary depending on suppliers, material quality, and regional factors. It's advisable to obtain real quotes from suppliers for precise cost information.

Safety Considerations in Environmental Testing:

Due to biosafety concerns, we believe that conducting validation experiments with this hardware in real factories at this stage poses a risk of biological leakage. Therefore, we have opted to perform these operations within a fume hood for added containment and safety measures.

This precautionary approach ensures that any potential biohazardous materials are safely contained and mitigates the risk of unintended biological release into the environment during testing.

If you have any questions, please contact us

Our hardware device embodies the principles of open-source and replicability. We firmly believe in the openness of science, and as part of our ongoing commitment, we plan to openly share the design blueprints, manufacturing files, and software source code of our hardware. This will enable other research teams to freely review, modify, and enhance our design to address a diverse range of application needs. Our vision includes actively encouraging and welcoming participation from the community. We aim to create online forums and establish a supportive community that will serve as a platform for collaboration and knowledge sharing, fostering continuous evolution and innovation in hardware. We eagerly anticipate the wider adoption of our open-source hardware by more teams, collectively driving the frontiers of scientific research. For inquiries and collaborations, please contact us at 1746921258@qq.com.

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