This page is intended to demonstrate how we have satisfied
various medal criteria by organizing links to evidence and explanations of our work.
Name |
Explanation |
Engineering success |
After undergoing several iterations of modular cloning, specifically involving testing and learning from a variety of 5' and 3' untranslated regions,
we have successfully created CAR and IL-6 fusion protein plasmids with high expression in HEK293 cells and desired functionality. Having started with
no transfection efficiency in our initial construction attempts, we have demonstrated our ability to analyze experimental results and improve upon our designs!
Additionally, we have developed a Chimeric Antigen Receptor assembly ToolKit (CAR-TK), which underwent two rounds of
design to optimize its functionality and user experience; CAR-TK further exemplifies our dedication to the engineering cycle. More details are on
our engineering page.
|
Human practices |
Our team has thoroughly explored the social and ethical considerations of
cachexia research from every angle, as detailed in our
human practices page. We developed our understanding of the technical
and patient-facing/delivery aspects of our therapy through six in-depth
conversations with experts in a variety of fields, such as cachectic patient clinical
care, sex-based differences in cachexia, age dependence of macrophage functionality,
and genetic circuitry. We further delved into the real-world implications of cachexia
as a whole along with our proposed therapy through two podcast episodes. Finally, we presented a poster
at a reputable synthetic biology conference, where we practiced defending the
importance of cachexia research and received exciting advice from researchers
with diverse backgrounds.
|
Name |
Explanation |
Basic part |
Our 3xFLAG-IL6-mCherry fusion protein coding sequence is a broadly useful basic part. We successfully designed, constructed, transfected, and purified this
protein for the purpose of incubating our CAR-expressing cells with fluorescent IL-6, but because IL-6 is a master regulatory cytokine crucial for
many human immune disorders and pathways, this part can be utilized by future teams studying everything from cytokine release syndrome to
diabetes to rheumatoid arthritis. More documentation is available on our part registry.
|
Software |
We developed software that solves crucial, foundational problems that we experienced during
our design and analysis of genetic sequences and their construction. Furthermore, we created software that automates
primer design for extracting CAR components from CAR plasmids, in accordance with our proposed CAR-TK assembly standards. Our
software page provides more
details on our codon optimization, pairwise sequence alignment, and CAR-TK primer design tools.
|
Education |
We created a YouTube channel with educational content including podcast episodes featuring cachexia experts, tutorials on tissue culture and bacterial plasmid extraction, and advice on life as a scientific researcher. Our channel is
here and more information on its educational content is on our education page.
|