Introduction

The Bye-O-Film project has two primary objectives. First, it aims to develop a sensor for detecting biofilm presence on medical implants. This sensor comprises a biological component, an E. coli biosensor with engineered plasmids for signal detection and communication, and an electronic sensor to relay this information to the patient. The second goal is to implement a phage therapy treatment strategy upon biofilm detection, utilizing Dispersin B to break down the biofilm by degrading polysaccharides. This approach benefits broad applicability, facilitates bacterial conversion to a planktonic form, and increases antibiotic susceptibility, ultimately reducing the required antibiotics for treatment. Additionally, the project utilizes a cyclic-di-GMP-based biosensor to monitor biofilm formation and employs an improved promotor (originally designed by the CUG China 2022 iGEM team) to control gene transcription. This page includes an overview of the biological parts made and designed in our project. Each part contains a hyperlink to the iGEM repository. To learn more about the genetic design approach, visit the Engineering page. To see the final results, head over to the Results page.


Figure 1: An overview of the created constructs during the Bye-o-film project, color coded based on the function of the construct (left) with a more detailed description of the particular constructs (right). Please visit the Engineering page for a comprehensive overview of the design strategies for the parts created. Image created using the resources from Slidesgo and Freepik.

Basic Parts

Composite Parts

Name Type Description Designer Length Link
BBa_K4720011 Composite Ptac+RBS iGEM Groningen 1465 bp http://parts.igem.org/Part:BBa_K4720011
BBa_K4720012 Composite GFP+T iGEM Groningen 767 bp http://parts.igem.org/Part:BBa_K4720012
BBa_K4720013 Composite RBS+GFP+TT iGEM Groningen 875 bp http://parts.igem.org/Part:BBa_K4720013
BBa_K4720024 Composite Pcl+RBS+RFP+TT iGEM Groningen 921 bp  http://parts.igem.org/Part:BBa_K4720014
BBa_K4720015 Composite RBS+GFP+TT+Pcl+RBS+RFP+TT iGEM Groningen 1804 bp http://parts.igem.org/Part:BBa_K4720015
BBa_K4720016 Composite Ptac+RBS+GFP+TT+Pcl+RBS+RFP+TT iGEM Groningen 3259 bp  http://parts.igem.org/Part:BBa_K4720016
BBa_K4720017 Composite J23100+RBS+FleQ+TT+Pcl+Ppel+RBS iGEM Groningen 1903 bp http://parts.igem.org/Part:BBa_K4720017
BBa_K4720018 Composite Pcl+Ppel+RBS iGEM Groningen 224 bp http://parts.igem.org/Part:BBa_K4720018
BBa_K4720019 Composite Ptac+RBS+GFP+T iGEM Groningen 2238 bp http://parts.igem.org/Part:BBa_K4720019
BBa_K4720020 Composite Pcl+Ppel+RBS+GFP+T iGEM Groningen 997 bp http://parts.igem.org/Part:BBa_K4720020
BBa_K4720021 Composite J23100+RBS+FleQ+TT+Pcl+Ppel+RBS+GFP+T iGEM Groningen 2676 bp http://parts.igem.org/Part:BBa_K4720021
BBa_K4720022 Composite Ptac+RBS+TT iGEM Groningen 1604 bp http://parts.igem.org/Part:BBa_K4720022
BBa_K4720023 Composite GFP+T+Pcl+RBS+RFP+TT iGEM Groningen 1696 bp http://parts.igem.org/Part:BBa_K4720023

New Parts

Name Type Description Designer Length Link
BBa_K4720101 Coding Sequence DspB  iGEM Groningen 1110 bp http://parts.igem.org/Part:BBa_K4720101
BBa_K4720102 Coding Sequence DspB_pIII iGEM Groningen 2379 bp http://parts.igem.org/Part:BBa_K4720102
BBa_K4720104 Composite J23100+RBS+FleQ+TT+Pcl+Ppel+RBS+Lux iGEM Groningen 7708 bp http://parts.igem.org/Part:BBa_K4720104
BBa_K4720105 Coding Sequence Luciferase gene cassette iGEM Groningen 5799 bp http://parts.igem.org/Part:BBa_K4720105
BBa_K4720106 Composite J23100+RBS+FleQ+TT+J23111+Ppel+RBS+GFP+T+J23118+RBS+RFP+T iGEM Groningen 3454 bp http://parts.igem.org/Part:BBa_K4720106
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